RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 IGKV6-21A0A0C4DH24 114 aa30.46■■■□□ 2.47
CCM2-218ENST00000541586 SMIM35A0A1B0GVV1 85 aa30.46■■■□□ 2.47
CCM2-218ENST00000541586 TGFB1I1O43294 461 aa30.46■■■□□ 2.47
CCM2-218ENST00000541586 DMP1Q13316 513 aaPredicted RBP30.46■■■□□ 2.47
CCM2-218ENST00000541586 MKRN4PQ13434 485 aaPredicted RBP30.46■■■□□ 2.47
CCM2-218ENST00000541586 TAF2Q6P1X5 1199 aa30.46■■■□□ 2.47
CCM2-218ENST00000541586 KIAA0319LQ8IZA0 1049 aa30.46■■■□□ 2.47
CCM2-218ENST00000541586 BSNDQ8WZ55 320 aa30.46■■■□□ 2.47
CCM2-218ENST00000541586 DPF3Q92784 378 aa30.46■■■□□ 2.47
CCM2-218ENST00000541586 PRDM5Q9NQX1 630 aaPredicted RBP30.46■■■□□ 2.47
CCM2-218ENST00000541586 TMEM39AQ9NV64 488 aa30.46■■■□□ 2.47
CCM2-218ENST00000541586 SLC16A4O15374 487 aa30.45■■■□□ 2.47
CCM2-218ENST00000541586 THPOP40225 353 aa30.45■■■□□ 2.47
CCM2-218ENST00000541586 MTIF2P46199 727 aaKnown RBP30.45■■■□□ 2.47
CCM2-218ENST00000541586 NPTX2P47972 431 aa30.45■■■□□ 2.47
CCM2-218ENST00000541586 ADAM9Q13443 819 aa30.45■■■□□ 2.47
CCM2-218ENST00000541586 HAUS6Q7Z4H7 955 aa30.45■■■□□ 2.47
CCM2-218ENST00000541586 SLC17A8Q8NDX2 589 aa30.45■■■□□ 2.47
CCM2-218ENST00000541586 POLR3FQ9H1D9 316 aaPredicted RBP30.45■■■□□ 2.47
CCM2-218ENST00000541586 IKZF4Q9H2S9 585 aa30.45■■■□□ 2.47
CCM2-218ENST00000541586 SUCLA2Q9P2R7 463 aaPredicted RBP30.45■■■□□ 2.47
CCM2-218ENST00000541586 VTNP04004 478 aa30.44■■■□□ 2.46
CCM2-218ENST00000541586 CLTBP09497 229 aa30.44■■■□□ 2.46
CCM2-218ENST00000541586 NR2F2P24468 414 aa30.44■■■□□ 2.46
CCM2-218ENST00000541586 SMTNP53814 917 aa30.44■■■□□ 2.46
CCM2-218ENST00000541586 SPIRE2Q8WWL2 714 aa30.44■■■□□ 2.46
CCM2-218ENST00000541586 DHX38Q92620 1227 aaKnown RBP30.44■■■□□ 2.46
CCM2-218ENST00000541586 ZNF668Q96K58 619 aaPredicted RBP30.44■■■□□ 2.46
CCM2-218ENST00000541586 ZNF830Q96NB3 372 aaPredicted RBP30.44■■■□□ 2.46
CCM2-218ENST00000541586 CCDC169A6NNP5 214 aa30.44■■■□□ 2.46
CCM2-218ENST00000541586 PRKCSHP14314 528 aaPredicted RBP30.44■■■□□ 2.46
CCM2-218ENST00000541586 PBX1P40424 430 aa30.44■■■□□ 2.46
CCM2-218ENST00000541586 GTF2BQ00403 316 aa30.44■■■□□ 2.46
CCM2-218ENST00000541586 RHPN2Q8IUC4 686 aa30.44■■■□□ 2.46
CCM2-218ENST00000541586 MAP7D2Q96T17 732 aa30.44■■■□□ 2.46
CCM2-218ENST00000541586 NTPCRQ9BSD7 190 aaKnown RBP30.44■■■□□ 2.46
CCM2-218ENST00000541586 GINS2Q9Y248 185 aa30.44■■■□□ 2.46
CCM2-218ENST00000541586 CETN3O15182 167 aa30.43■■■□□ 2.46
CCM2-218ENST00000541586 SPECC1LQ69YQ0 1117 aa30.43■■■□□ 2.46
CCM2-218ENST00000541586 RSPH3Q86UC2 560 aa30.43■■■□□ 2.46
CCM2-218ENST00000541586 C7orf61Q8IZ16 206 aa30.43■■■□□ 2.46
CCM2-218ENST00000541586 LGALS16A8MUM7 142 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 EVI5O60447 810 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 CTSHP09668 335 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 IER5Q5VY09 327 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 LINC01465Q8N7H1 131 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 TMEM161BQ8NDZ6 487 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 TCP11Q8WWU5 503 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 PPP1R12CQ9BZL4 782 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 GBP3Q9H0R5 595 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 KMT5AQ9NQR1 393 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP30.42■■■□□ 2.46
CCM2-218ENST00000541586 GAS2O43903 313 aaKnown RBP30.42■■■□□ 2.46
CCM2-218ENST00000541586 GNA14O95837 355 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 NR3C1P04150 777 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 PRPF31Q8WWY3 499 aaKnown RBP30.42■■■□□ 2.46
CCM2-218ENST00000541586 PSPC1Q8WXF1 523 aaKnown RBP30.42■■■□□ 2.46
CCM2-218ENST00000541586 IFT74Q96LB3 600 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 ACCSQ96QU6 501 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 KIFC3Q9BVG8 833 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 NOC4LQ9BVI4 516 aaKnown RBP30.42■■■□□ 2.46
CCM2-218ENST00000541586 TMEM206Q9H813 350 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 PCDH10Q9P2E7 1040 aa30.42■■■□□ 2.46
CCM2-218ENST00000541586 CLIC2O15247 247 aa30.41■■■□□ 2.46
CCM2-218ENST00000541586 TPM2P07951 284 aa30.41■■■□□ 2.46
CCM2-218ENST00000541586 MIIPQ5JXC2 388 aa30.41■■■□□ 2.46
CCM2-218ENST00000541586 HS2ST1Q7LGA3 356 aa30.41■■■□□ 2.46
CCM2-218ENST00000541586 SYCP3Q8IZU3 236 aa30.41■■■□□ 2.46
CCM2-218ENST00000541586 KCNF1Q9H3M0 494 aa30.41■■■□□ 2.46
CCM2-218ENST00000541586 HIPK3Q9H422 1215 aa30.41■■■□□ 2.46
CCM2-218ENST00000541586 PES1O00541 588 aaKnown RBP30.4■■■□□ 2.46
CCM2-218ENST00000541586 CKBP12277 381 aa30.4■■■□□ 2.46
CCM2-218ENST00000541586 RPL13P26373 211 aaKnown RBP30.4■■■□□ 2.46
CCM2-218ENST00000541586 ARL2P36404 184 aa30.4■■■□□ 2.46
CCM2-218ENST00000541586 GSDMDP57764 484 aa30.4■■■□□ 2.46
CCM2-218ENST00000541586 UBXN1Q04323 297 aa30.4■■■□□ 2.46
CCM2-218ENST00000541586 ARID5BQ14865 1188 aa30.4■■■□□ 2.46
CCM2-218ENST00000541586 NFIL3Q16649 462 aa30.4■■■□□ 2.46
CCM2-218ENST00000541586 CCDC40Q4G0X9 1142 aa30.4■■■□□ 2.46
CCM2-218ENST00000541586 NME8Q8N427 588 aa30.4■■■□□ 2.46
CCM2-218ENST00000541586 RBAK-RBAKDNI3L0D1 243 aa30.39■■■□□ 2.46
CCM2-218ENST00000541586 MARSP56192 900 aaKnown RBP30.39■■■□□ 2.46
CCM2-218ENST00000541586 NLRP11P59045 1033 aaKnown RBP30.39■■■□□ 2.46
CCM2-218ENST00000541586 BFSP2Q13515 415 aa30.39■■■□□ 2.46
CCM2-218ENST00000541586 KIZQ2M2Z5 673 aa30.39■■■□□ 2.46
CCM2-218ENST00000541586 ZNF618Q5T7W0 954 aa30.39■■■□□ 2.46
CCM2-218ENST00000541586 SCLT1Q96NL6 688 aa30.39■■■□□ 2.46
CCM2-218ENST00000541586 AGPAT3Q9NRZ7 376 aa30.39■■■□□ 2.46
CCM2-218ENST00000541586 SRGAP2CP0DJJ0 459 aa30.39■■■□□ 2.45
CCM2-218ENST00000541586 TBX2Q13207 712 aaPredicted RBP30.39■■■□□ 2.45
CCM2-218ENST00000541586 TRIM71Q2Q1W2 868 aaKnown RBP30.39■■■□□ 2.45
CCM2-218ENST00000541586 CCDC155Q8N6L0 562 aa30.39■■■□□ 2.45
CCM2-218ENST00000541586 GOLGA5Q8TBA6 731 aa30.39■■■□□ 2.45
CCM2-218ENST00000541586 CAGE1Q8TC20 777 aa30.39■■■□□ 2.45
CCM2-218ENST00000541586 ASAP3Q8TDY4 903 aa30.39■■■□□ 2.45
CCM2-218ENST00000541586 CACTINQ8WUQ7 758 aaKnown RBP30.39■■■□□ 2.45
CCM2-218ENST00000541586 NLRP4Q96MN2 994 aa30.39■■■□□ 2.45
CCM2-218ENST00000541586 PRKAG2Q9UGJ0 569 aa30.39■■■□□ 2.45
CCM2-218ENST00000541586 ADGRA3Q8IWK6 1321 aa30.38■■■□□ 2.45
CCM2-218ENST00000541586 DENND3A2RUS2 1198 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms