RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 MYL10Q9BUA6 226 aa5.41□□□□□ -1.54
SNHG1-217ENST00000541578 SYNPO2Q9UMS6 1093 aa5.41□□□□□ -1.54
SNHG1-217ENST00000541578 LUC7L2Q9Y383 392 aaKnown RBP5.41□□□□□ -1.54
SNHG1-217ENST00000541578 SLC30A1Q9Y6M5 507 aa5.41□□□□□ -1.54
SNHG1-217ENST00000541578 CEP164Q9UPV0 1460 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 LOC102724159A0A0B4J2E5 919 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 MATN3O15232 486 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 EIF5BO60841 1220 aaKnown RBP5.4□□□□□ -1.54
SNHG1-217ENST00000541578 EIF3JO75822 258 aaKnown RBP5.4□□□□□ -1.54
SNHG1-217ENST00000541578 PRPF6O94906 941 aaKnown RBP5.4□□□□□ -1.54
SNHG1-217ENST00000541578 TNFRSF1AP19438 455 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 ACO1P21399 889 aaKnown RBP5.4□□□□□ -1.54
SNHG1-217ENST00000541578 CD40P25942 277 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 ID4P47928 161 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 LSSP48449 732 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 ATP2C1P98194 919 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-217ENST00000541578 DUSP8Q13202 625 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 LRRC32Q14392 662 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 MYBPC3Q14896 1274 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 MLC1Q15049 377 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 PRKD1Q15139 912 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-217ENST00000541578 PWP2Q15269 919 aaKnown RBP5.4□□□□□ -1.54
SNHG1-217ENST00000541578 LRRC41Q15345 812 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 GFOD2Q3B7J2 385 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 KANSL1Q7Z3B3 1105 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 BMP8AQ7Z5Y6 402 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 PNMA8AQ86V59 439 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-217ENST00000541578 GPR135Q8IZ08 494 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 SMC1BQ8NDV3 1235 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 SHCBP1Q8NEM2 672 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 RTF1Q92541 710 aaKnown RBP5.4□□□□□ -1.54
SNHG1-217ENST00000541578 EDAQ92838 391 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 FAM89AQ96GI7 184 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 DYDC2Q96IM9 177 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 WDR92Q96MX6 357 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 CDH19Q9H159 772 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 SLC6A15Q9H2J7 730 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 POFUT1Q9H488 388 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 ZMAT4Q9H898 229 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 PLA2G3Q9NZ20 509 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 MRFAP1Q9Y605 127 aa5.4□□□□□ -1.54
SNHG1-217ENST00000541578 TTBK1Q5TCY1 1321 aaPredicted RBP5.4□□□□□ -1.55
SNHG1-217ENST00000541578 A0A0A6YYJ9 748 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 GOLGA8BA8MQT2 603 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 ZSCAN20P17040 1043 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-217ENST00000541578 ADCYAP1R1P41586 468 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 ADCY7P51828 1080 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 RHBDL3P58872 404 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 SMAD3P84022 425 aaKnown RBP5.39□□□□□ -1.55
SNHG1-217ENST00000541578 ABCB5Q2M3G0 1257 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 KIAA1841Q6NSI8 718 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 KSR2Q6VAB6 950 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 Q6ZSN1 163 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 C14orf80Q86SX3 495 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 AMOTL1Q8IY63 956 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 JPH3Q8WXH2 748 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-217ENST00000541578 RABGGTAQ92696 567 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 PMM1Q92871 262 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 NKD2Q969F2 451 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-217ENST00000541578 SLC7A6OSQ96CW6 309 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-217ENST00000541578 AHCYL2Q96HN2 611 aaKnown RBP5.39□□□□□ -1.55
SNHG1-217ENST00000541578 RPS6KC1Q96S38 1066 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 MENTQ9BUN1 341 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 AGO3Q9H9G7 860 aaKnown RBP5.39□□□□□ -1.55
SNHG1-217ENST00000541578 IP6K2Q9UHH9 426 aa5.39□□□□□ -1.55
SNHG1-217ENST00000541578 RBM8AQ9Y5S9 174 aaKnown RBP5.39□□□□□ -1.55
SNHG1-217ENST00000541578 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-217ENST00000541578 C2orf78A6NCI8 922 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 DAPK3O43293 454 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 TGM5O43548 720 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 PRKD3O94806 890 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 CFBP00751 764 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 MSX2P35548 267 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-217ENST00000541578 SESN3P58005 492 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 HHEXQ03014 270 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 FOXL1Q12952 345 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 RIN1Q13671 783 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 GRM7Q14831 915 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 DDB1Q16531 1140 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 SPDYAQ5MJ70 313 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 FAM102BQ5T8I3 360 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 MAMDC4Q6UXC1 1216 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 ADGRE4PQ86SQ3 457 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 CLEC14AQ86T13 490 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 FAM9AQ8IZU1 332 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-217ENST00000541578 MPHOSPH6Q99547 160 aaKnown RBP5.38□□□□□ -1.55
SNHG1-217ENST00000541578 PITHD1Q9GZP4 211 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-217ENST00000541578 MTG2Q9H4K7 406 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 POLR3BQ9NW08 1133 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-217ENST00000541578 COMMD10Q9Y6G5 202 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 ARHGEF11O15085 1522 aa5.38□□□□□ -1.55
SNHG1-217ENST00000541578 A0A1W2PRX2 142 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 GABRDO14764 452 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 MT-CO1P00395 513 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 BPIFB4P59827 614 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 ZXDAP98168 799 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 TCIRG1Q13488 830 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 UBE4AQ14139 1066 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 SAFB2Q14151 953 aaKnown RBP eCLIP5.37□□□□□ -1.55
SNHG1-217ENST00000541578 MAN2A1Q16706 1144 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms