RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ELMO3Q96BJ8 720 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 CCDC74BQ96LY2 380 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 SDF4Q9BRK5 362 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 ADAM19Q9H013 955 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 GP6Q9HCN6 339 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 PKD2L1Q9P0L9 805 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 AASSQ9UDR5 926 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 TUBD1Q9UJT1 453 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 CORO2BQ9UQ03 480 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 NOC2LQ9Y3T9 749 aaKnown RBP6.24□□□□□ -1.41
DDB1-219ENST00000541513 PCDHA11Q9Y5I1 949 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 SPO11Q9Y5K1 396 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 PHRF1Q9P1Y6 1649 aaKnown RBP6.24□□□□□ -1.41
DDB1-219ENST00000541513 TTC21BQ7Z4L5 1316 aa6.24□□□□□ -1.41
DDB1-219ENST00000541513 DDX3XO00571 662 aaKnown RBP eCLIP6.23□□□□□ -1.41
DDB1-219ENST00000541513 EIF4EBP3O60516 100 aaPredicted RBP6.23□□□□□ -1.41
DDB1-219ENST00000541513 PLA2G6O60733 806 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 SGPL1O95470 568 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 ALDH2P05091 517 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 HNRNPLP14866 589 aaKnown RBP eCLIP6.23□□□□□ -1.416e-6■■■□□ 18.9
DDB1-219ENST00000541513 ALOX12P18054 663 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 CNTFP26441 200 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 NOP2P46087 812 aaKnown RBP6.23□□□□□ -1.41
DDB1-219ENST00000541513 ALDH9A1P49189 494 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 TUBP50607 506 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 ZNF132P52740 706 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 NR1H2P55055 460 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 RING1Q06587 406 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 POU4F2Q12837 409 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 FOXC1Q12948 553 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 CDC16Q13042 620 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 PDCD1Q15116 288 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 TAF5Q15542 800 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 FAM110CQ1W6H9 321 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 SLC30A6Q6NXT4 461 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 EGFL6Q8IUX8 553 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 MRPL41Q8IXM3 137 aaKnown RBP6.23□□□□□ -1.41
DDB1-219ENST00000541513 TEX11Q8IYF3 940 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 CEP57L1Q8IYX8 460 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 CCDC191Q8NCU4 936 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 MSANTD4Q8NCY6 345 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 NANOS1Q8WY41 292 aaKnown RBP6.23□□□□□ -1.41
DDB1-219ENST00000541513 DPF3Q92784 378 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 BRF1Q92994 677 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 SNX21Q969T3 373 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 COA7Q96BR5 231 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 IWS1Q96ST2 819 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 PTPN18Q99952 460 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 STK33Q9BYT3 514 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 TXLNGYQ9BZA5 131 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 C22orf23Q9BZE7 217 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 UNKQ9C0B0 810 aaKnown RBP6.23□□□□□ -1.41
DDB1-219ENST00000541513 WNT10AQ9GZT5 417 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 SOX17Q9H6I2 414 aaPredicted RBP6.23□□□□□ -1.41
DDB1-219ENST00000541513 ZWILCHQ9H900 591 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 IRAK4Q9NWZ3 460 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 DNAJC28Q9NX36 388 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 DACT1Q9NYF0 836 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 TJP2Q9UDY2 1190 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 DENND2AQ9ULE3 1009 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 SIK3Q9Y2K2 1263 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 RRP7AQ9Y3A4 280 aaKnown RBP6.23□□□□□ -1.41
DDB1-219ENST00000541513 SLIT3O75094 1523 aa6.23□□□□□ -1.41
DDB1-219ENST00000541513 A0A1W2PPH5 198 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 PI4K2BG5E9Z4 385 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 RRP9O43818 475 aaKnown RBP6.22□□□□□ -1.41
DDB1-219ENST00000541513 TMEM127O75204 238 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 SMNDC1O75940 238 aaKnown RBP eCLIP6.22□□□□□ -1.41
DDB1-219ENST00000541513 URI1O94763 535 aaPredicted RBP6.22□□□□□ -1.41
DDB1-219ENST00000541513 ZIC2O95409 532 aaPredicted RBP6.22□□□□□ -1.41
DDB1-219ENST00000541513 MC4RP32245 332 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 VAMP2P63027 116 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 HNRNPUQ00839 825 aaKnown RBP eCLIP6.22□□□□□ -1.41
DDB1-219ENST00000541513 KIF23Q02241 960 aaPredicted RBP6.22□□□□□ -1.41
DDB1-219ENST00000541513 PAK1Q13153 545 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 PPP2R5CQ13362 524 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 PMS2P11Q13670 270 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 PFKFB4Q16877 469 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 PRSS53Q2L4Q9 553 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 CATSPER4Q7RTX7 472 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 SDCCAG8Q86SQ7 713 aaPredicted RBP6.22□□□□□ -1.41
DDB1-219ENST00000541513 VSIG1Q86XK7 387 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 MEIOBQ8N635 442 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 SPPL3Q8TCT6 385 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 UCMAQ8WVF2 138 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 ERCC4Q92889 916 aaPredicted RBP6.22□□□□□ -1.41
DDB1-219ENST00000541513 ATP2A3Q93084 1043 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 TRIM11Q96F44 468 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 TIGD1Q96MW7 591 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 CGRRF1Q99675 332 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 NCAPGQ9BPX3 1015 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 NOL6Q9H6R4 1146 aaKnown RBP6.22□□□□□ -1.41
DDB1-219ENST00000541513 PANK3Q9H999 370 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 TIMMDC1Q9NPL8 285 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 GPR27Q9NS67 375 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.22□□□□□ -1.41
DDB1-219ENST00000541513 PDRG1Q9NUG6 133 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 NSD3Q9BZ95 1437 aa6.22□□□□□ -1.41
DDB1-219ENST00000541513 MAP2P11137 1827 aaKnown RBP6.22□□□□□ -1.41
DDB1-219ENST00000541513 SPATA31A6Q5VVP1 1343 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms