RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 DNM1Q05193 864 aaKnown RBP10.19□□□□□ -0.78
SNHG1-215ENST00000540904 MAPK7Q13164 816 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 DMP1Q13316 513 aaPredicted RBP10.19□□□□□ -0.78
SNHG1-215ENST00000540904 MCM6Q14566 821 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 CCDC85BQ15834 202 aaPredicted RBP10.19□□□□□ -0.78
SNHG1-215ENST00000540904 MAPK6Q16659 721 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 TMEM132AQ24JP5 1023 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 ARSHQ5FYA8 562 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 CLLU1OSQ5K130 101 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 UBXN11Q5T124 520 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 RRAGBQ5VZM2 374 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 ZNF598Q86UK7 904 aaKnown RBP10.19□□□□□ -0.78
SNHG1-215ENST00000540904 GPBP1Q86WP2 473 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 CDR2LQ86X02 465 aaPredicted RBP10.19□□□□□ -0.78
SNHG1-215ENST00000540904 DAW1Q8N136 415 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 HELQQ8TDG4 1101 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 RAD54LQ92698 747 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 PGBD4Q96DM1 585 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 CASD1Q96PB1 797 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 TIPINQ9BVW5 301 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 EIF2AQ9BY44 585 aaKnown RBP10.19□□□□□ -0.78
SNHG1-215ENST00000540904 PANK2Q9BZ23 570 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 TRIM6Q9C030 488 aaPredicted RBP10.19□□□□□ -0.78
SNHG1-215ENST00000540904 TMEM117Q9H0C3 514 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 PRMT7Q9NVM4 692 aaPredicted RBP10.19□□□□□ -0.78
SNHG1-215ENST00000540904 KCND2Q9NZV8 630 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 HCSTQ9UBK5 93 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 CCDC39Q9UFE4 941 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 CFAP45Q9UL16 551 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 USP20Q9Y2K6 914 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 ZDHHC9Q9Y397 364 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 RWDD3Q9Y3V2 267 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 LOXHD1Q8IVV2 1947 aa10.19□□□□□ -0.78
SNHG1-215ENST00000540904 TTLL13PA6NNM8 815 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 MEIS3P2A8K0S8 358 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 H3BNC9 293 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 K7ERI5 159 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 ZNF623O75123 536 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 PPP6R2O75170 966 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 BRD1O95696 1058 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 PRKCBP05771 671 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 KRT18P05783 430 aaKnown RBP10.18□□□□□ -0.78
SNHG1-215ENST00000540904 NCLP19338 710 aaKnown RBP10.18□□□□□ -0.78
SNHG1-215ENST00000540904 DDIT3P35638 169 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 ME1P48163 572 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 EFNA5P52803 228 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 GPM6BQ13491 265 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 PRPF4BQ13523 1007 aaKnown RBP10.18□□□□□ -0.78
SNHG1-215ENST00000540904 FAM187BQ17R55 369 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 ATL3Q6DD88 541 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 GLB1LQ6UWU2 654 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 LRRC55Q6ZSA7 311 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 LRRC43Q8N309 656 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 KCNG4Q8TDN1 519 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 LARP4BQ92615 738 aaKnown RBP10.18□□□□□ -0.78
SNHG1-215ENST00000540904 CCDC51Q96ER9 411 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 PRIMPOLQ96LW4 560 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 REEP2Q9BRK0 252 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 C11orf84Q9BUA3 381 aaPredicted RBP10.18□□□□□ -0.78
SNHG1-215ENST00000540904 CCDC113Q9H0I3 377 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 FZD8Q9H461 694 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 ZHX3Q9H4I2 956 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 C17orf75Q9HAS0 396 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 KMT5AQ9NQR1 393 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 TYW1Q9NV66 732 aaKnown RBP10.18□□□□□ -0.78
SNHG1-215ENST00000540904 INPP5FQ9Y2H2 1132 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 HES2Q9Y543 173 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 MTCH2Q9Y6C9 303 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 CDH23Q9H251 3354 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 COL4A6Q14031 1691 aa10.18□□□□□ -0.78
SNHG1-215ENST00000540904 CNTNAP2Q9UHC6 1331 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 A0A087X0B3 334 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 A0A1B0GUA9 196 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 C5orf67F2Z3F1 127 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 ACKR2O00590 384 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 SLC16A4O15374 487 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 CUTAO60888 179 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 CSPG5O95196 566 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 NPTXRO95502 500 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 RB1P06400 928 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 PLS3P13797 630 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 STAT6P42226 847 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 PTPROQ16827 1216 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 NOMO2Q5JPE7 1267 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 SLC27A1Q6PCB7 646 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 AGMOQ6ZNB7 445 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 CCDC73Q6ZRK6 1079 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 MRPL10Q7Z7H8 261 aaKnown RBP10.17□□□□□ -0.78
SNHG1-215ENST00000540904 PDILTQ8N807 584 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 SMG8Q8ND04 991 aaKnown RBP10.17□□□□□ -0.78
SNHG1-215ENST00000540904 CNNM3Q8NE01 707 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 CHAMP1Q96JM3 812 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 APOL6Q9BWW8 343 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 PLVAPQ9BX97 442 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 NXF3Q9H4D5 531 aaKnown RBP10.17□□□□□ -0.78
SNHG1-215ENST00000540904 CWH43Q9H720 699 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 RSAD1Q9HA92 442 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 ALG13Q9NP73 1137 aaKnown RBP10.17□□□□□ -0.78
SNHG1-215ENST00000540904 AAASQ9NRG9 546 aa10.17□□□□□ -0.78
SNHG1-215ENST00000540904 CHD7Q9P2D1 2997 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms