RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 PAK6Q9NQU5 681 aaPredicted RBP7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 ODF2LQ9ULJ1 636 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 Q9Y3F1 56 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 HTTP42858 3142 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 CENPFP49454 3210 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 A6NJR5 290 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 CCDC169A6NNP5 214 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 RSPH10B2B2RC85 870 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 PSMA7O14818 248 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 ADCY6O43306 1168 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 ZEB2O60315 1214 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 HBP1O60381 514 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 KPNA6O60684 536 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 STBD1O95210 358 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 MMP3P08254 477 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 RSPH10BP0C881 870 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 BMP6P22004 513 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 GUCY2CP25092 1073 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 RFC5P40937 340 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 PPP1R2P41236 205 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 PRCPP42785 496 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 MRE11P49959 708 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 DNM2P50570 870 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 SMTNP53814 917 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 IGBP1P78318 339 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 BEX3Q00994 111 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 STK4Q13043 487 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 PLCB4Q15147 1175 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 LRRC41Q15345 812 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 FSCN1Q16658 493 aaKnown RBP7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 TMEM259Q4ZIN3 620 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 CT47A1Q5JQC4 288 aaPredicted RBP7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 GNASQ5JWF2 1037 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 ODR4Q5SWX8 454 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 STXBP4Q6ZWJ1 553 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 SFR1Q86XK3 245 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 EXOC8Q8IYI6 725 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 MYOCDQ8IZQ8 938 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 AOPEPQ8N6M6 819 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 METTL13Q8N6R0 699 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 MCPH1Q8NEM0 835 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 ANP32BQ92688 251 aaKnown RBP7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 KIFAP3Q92845 792 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 HPS3Q969F9 1004 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 DHTKD1Q96HY7 919 aaPredicted RBP7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 IFT74Q96LB3 600 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 DEFB118Q96PH6 123 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 RNPEPQ9H4A4 650 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 SUGCTQ9HAC7 445 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 GRPEL1Q9HAV7 217 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 ATP6V0A4Q9HBG4 840 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 XPNPEP3Q9NQH7 507 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 LARSQ9P2J5 1176 aaKnown RBP7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 DDX20Q9UHI6 824 aaKnown RBP7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 KCNG1Q9UIX4 513 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 CTNND2Q9UQB3 1225 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 GNEQ9Y223 722 aaKnown RBP7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 GDAQ9Y2T3 454 aa7.33□□□□□ -1.24
CLTCL1-206ENST00000540896 SLC35F4A4IF30 521 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 CCDC85CA6NKD9 419 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 RNF225M0QZC1 329 aaPredicted RBP7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 MSCO60682 206 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 MAFO75444 373 aaPredicted RBP7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 GCNT3O95395 438 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 SGPL1O95470 568 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 PGK1P00558 417 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 TFRCP02786 760 aaKnown RBP7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 GJB1P08034 283 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 PLS3P13797 630 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 INSRRP14616 1297 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 ERCC5P28715 1186 aaPredicted RBP7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 PEX3P56589 373 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 SOX10P56693 466 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 STX17P56962 302 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 GJA9P57773 515 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 RELBQ01201 579 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 MYL5Q02045 173 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 KCNMA1Q12791 1236 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 PPFIA1Q13136 1202 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 PAK1Q13153 545 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 EMC2Q15006 297 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 ZNF484Q5JVG2 852 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 SV2AQ7L0J3 742 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 LUZP1Q86V48 1076 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 FAM178BQ8IXR5 827 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 ADSSL1Q8N142 457 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 RETREG2Q8NC44 543 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 U2AF1L4Q8WU68 220 aaKnown RBP7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 NELFBQ8WX92 580 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 VTI1AQ96AJ9 217 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 TMEM143Q96AN5 459 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 TSG101Q99816 390 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 BPIFA3Q9BQP9 254 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 JPH2Q9BR39 696 aaPredicted RBP7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 C16orf70Q9BSU1 422 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 POLMQ9NP87 494 aaPredicted RBP7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 GPRC5CQ9NQ84 441 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 KMT5AQ9NQR1 393 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 SEL1LQ9UBV2 794 aa7.32□□□□□ -1.24
CLTCL1-206ENST00000540896 PPME1Q9Y570 386 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms