RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PPP2R5DQ14738 602 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 NONOQ15233 471 aaKnown RBP eCLIP5.62□□□□□ -1.51
PROM1-220ENST00000540805 SPDYCQ5MJ68 293 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 CIAPIN1Q6FI81 312 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 KCTD1Q719H9 257 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 TRPM8Q7Z2W7 1104 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 FAM133AQ8N9E0 248 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 DRAXINQ8NBI3 349 aaPredicted RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 SLC10A4Q96EP9 437 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 IFT74Q96LB3 600 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 PHACTR1Q9C0D0 580 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 TDRD3Q9H7E2 651 aaKnown RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 RIC8AQ9NPQ8 531 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 KCNQ5Q9NR82 932 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 PIM2Q9P1W9 311 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 ADAMTS1Q9UHI8 967 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 PCDHA1Q9Y5I3 950 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 TTI1O43156 1089 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 GAS7O60861 476 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 COQ9O75208 318 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 BBOX1O75936 387 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 ATP4AP20648 1035 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 TECP42680 631 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 GABPAQ06546 454 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 C10orf76Q5T2E6 689 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 ARHGEF16Q5VV41 709 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 CC2D2BQ6DHV5 1058 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 SLC30A9Q6PML9 568 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 SESTD1Q86VW0 696 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 LONP2Q86WA8 852 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 LRRC34Q8IZ02 419 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 MYCT1Q8N699 235 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 DYNLL2Q96FJ2 89 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 ZNF317Q96PQ6 595 aaPredicted RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 FMO2Q99518 471 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 PDGFDQ9GZP0 370 aaPredicted RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 TAOK3Q9H2K8 898 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 STK17AQ9UEE5 414 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 AMACRQ9UHK6 382 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 MAD2L2Q9UI95 211 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 ATP8A1Q9Y2Q0 1164 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 TTLL3Q9Y4R7 772 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 RBBP6Q7Z6E9 1792 aaKnown RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 PLIN4Q96Q06 1357 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 MYMKA6NI61 221 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 EVI5O60447 810 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 NOL4O94818 638 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 SHBGP04278 402 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 VIMP08670 466 aaKnown RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 NQO1P15559 274 aaKnown RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 TPP2P29144 1249 aaPredicted RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 PAPOLAP51003 745 aaKnown RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 SNAP25P60880 206 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 TRPC3Q13507 836 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 KCTD2Q14681 263 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 ZRSR2Q15696 482 aaKnown RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 PRAMEF18Q5VWM3 479 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 KRT25Q7Z3Z0 450 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 CCDC65Q8IXS2 484 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 LARP4BQ92615 738 aaKnown RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 L3MBTL3Q96JM7 780 aaPredicted RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 ELAC2Q9BQ52 826 aaKnown RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 RAB17Q9H0T7 212 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 GOLPH3Q9H4A6 298 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 INTS9Q9NV88 658 aaKnown RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 CCPG1Q9ULG6 757 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 PCDHB13Q9Y5F0 798 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 IGKV6D-41A0A0C4DH26 115 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 EXOC3O60645 756 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 PPFIA2O75334 1257 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 RNF8O76064 485 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 RASA1P20936 1047 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 FKBP3Q00688 224 aaKnown RBP5.61□□□□□ -1.51
PROM1-220ENST00000540805 ZNF268Q14587 947 aaPredicted RBP5.61□□□□□ -1.51
PROM1-220ENST00000540805 ARMCX6Q7L4S7 300 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 PEX26Q7Z412 305 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 PIGWQ7Z7B1 504 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 SP8Q8IXZ3 490 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 SLC44A5Q8NCS7 719 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 ATXN2LQ8WWM7 1075 aaKnown RBP5.61□□□□□ -1.51
PROM1-220ENST00000540805 SGIP1Q9BQI5 828 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 SYT15Q9BQS2 421 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 MXD3Q9BW11 206 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 TRIM31Q9BZY9 425 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 PSTPIP2Q9H939 334 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 DDX4Q9NQI0 724 aaKnown RBP5.61□□□□□ -1.51
PROM1-220ENST00000540805 CACNA1GO43497 2377 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 TLDC2A0PJX2 215 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 M0QZ92 97 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 RGS16O15492 202 aaPredicted RBP5.61□□□□□ -1.51
PROM1-220ENST00000540805 ATP6V1G1O75348 118 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 SPATA31D3P0C874 917 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 CCND1P24385 295 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 MMP13P45452 471 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 ERFP50548 548 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 LRRC41Q15345 812 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 DENND2CQ68D51 928 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 FOXR2Q6PJQ5 311 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 SPATA31D4Q6ZUB0 917 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 DAAM2Q86T65 1068 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms