RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 GNGT1P63211 74 aa15.08■□□□□ 0
USP3-204ENST00000540797 LRRC8CQ8TDW0 803 aa15.08■□□□□ 0
USP3-204ENST00000540797 AGAP1Q9UPQ3 857 aa15.08■□□□□ 0
USP3-204ENST00000540797 PPP2R3BQ9Y5P8 575 aa15.08■□□□□ 0
USP3-204ENST00000540797 IQGAP1P46940 1657 aa15.08■□□□□ 0
USP3-204ENST00000540797 PMLP29590 882 aa15.07■□□□□ 0
USP3-204ENST00000540797 EPHB4P54760 987 aa15.07■□□□□ 0
USP3-204ENST00000540797 WDR72Q3MJ13 1102 aa15.07■□□□□ 0
USP3-204ENST00000540797 NOP9Q86U38 636 aaKnown RBP15.07■□□□□ 0
USP3-204ENST00000540797 CFAP36Q96G28 342 aa15.07■□□□□ 0
USP3-204ENST00000540797 UPP2O95045 317 aa15.07■□□□□ 0
USP3-204ENST00000540797 IL1R1P14778 569 aa15.07■□□□□ 0
USP3-204ENST00000540797 ACOT2P49753 483 aa15.07■□□□□ 0
USP3-204ENST00000540797 NBPF12Q5TAG4 269 aaPredicted RBP15.07■□□□□ 0
USP3-204ENST00000540797 ZNF746Q6NUN9 644 aaPredicted RBP15.07■□□□□ 0
USP3-204ENST00000540797 TTC30AQ86WT1 665 aa15.07■□□□□ 0
USP3-204ENST00000540797 NUDCD1Q96RS6 583 aa15.07■□□□□ 0
USP3-204ENST00000540797 CREB3O43889 395 aa15.07■□□□□ 0
USP3-204ENST00000540797 PALMO75781 387 aa15.07■□□□□ 0
USP3-204ENST00000540797 GFPT1Q06210 699 aaPredicted RBP15.07■□□□□ 0
USP3-204ENST00000540797 IQCB1Q15051 598 aa15.07■□□□□ 0
USP3-204ENST00000540797 ANKRD40Q6AI12 368 aa15.07■□□□□ 0
USP3-204ENST00000540797 RNF180Q86T96 592 aa15.07■□□□□ 0
USP3-204ENST00000540797 HPS3Q969F9 1004 aa15.07■□□□□ 0
USP3-204ENST00000540797 EFCC1Q9HA90 598 aa15.07■□□□□ 0
USP3-204ENST00000540797 KLHL8Q9P2G9 620 aaPredicted RBP15.07■□□□□ 0
USP3-204ENST00000540797 F8W8V4 182 aa15.07■□□□□ 0
USP3-204ENST00000540797 TADA2AO75478 443 aa15.07■□□□□ 0
USP3-204ENST00000540797 GPC4O75487 556 aa15.07■□□□□ 0
USP3-204ENST00000540797 EFCAB12Q6NXP0 572 aa15.07■□□□□ 0
USP3-204ENST00000540797 PDIK1LQ8N165 341 aa15.07■□□□□ 0
USP3-204ENST00000540797 PXDNQ92626 1479 aa15.07■□□□□ 0
USP3-204ENST00000540797 PLEKHH3Q7Z736 793 aa15.06■□□□□ 0
USP3-204ENST00000540797 GPRASP2Q96D09 838 aa15.06■□□□□ 0
USP3-204ENST00000540797 PCSK1NQ9UHG2 260 aa15.06■□□□□ 0
USP3-204ENST00000540797 DIS3Q9Y2L1 958 aaKnown RBP15.06■□□□□ 0
USP3-204ENST00000540797 INPP5BP32019 993 aa15.06■□□□□ 0
USP3-204ENST00000540797 PPARGP37231 505 aaPredicted RBP15.06■□□□□ 0
USP3-204ENST00000540797 RBP5P82980 135 aa15.06■□□□□ 0
USP3-204ENST00000540797 DHX9Q08211 1270 aaKnown RBP15.06■□□□□ 0
USP3-204ENST00000540797 BTBD8Q5XKL5 378 aa15.06■□□□□ 0
USP3-204ENST00000540797 TRIM72Q6ZMU5 477 aa15.06■□□□□ 0
USP3-204ENST00000540797 FAF2Q96CS3 445 aa15.06■□□□□ 0
USP3-204ENST00000540797 NUP85Q9BW27 656 aa15.06■□□□□ 0
USP3-204ENST00000540797 HEY1Q9Y5J3 304 aa15.06■□□□□ 0
USP3-204ENST00000540797 MOCS2O96007 188 aaPredicted RBP15.06■□□□□ 0
USP3-204ENST00000540797 NNMTP40261 264 aa15.06■□□□□ 0
USP3-204ENST00000540797 GCLCP48506 637 aaPredicted RBP15.06■□□□□ 0
USP3-204ENST00000540797 TTC13Q8NBP0 860 aa15.06■□□□□ 0
USP3-204ENST00000540797 ZNF564Q8TBZ8 553 aaPredicted RBP15.06■□□□□ 0
USP3-204ENST00000540797 GLT1D1Q96MS3 346 aa15.06■□□□□ 0
USP3-204ENST00000540797 HEMGNQ9BXL5 484 aa15.06■□□□□ 0
USP3-204ENST00000540797 RRN3P2A6NIE6 340 aa15.06■□□□□ 0
USP3-204ENST00000540797 NOL3O60936 208 aaKnown RBP15.06■□□□□ 0
USP3-204ENST00000540797 KPNA2P52292 529 aaKnown RBP15.06■□□□□ 0
USP3-204ENST00000540797 NME3Q13232 169 aa15.06■□□□□ 0
USP3-204ENST00000540797 TMEM132DQ14C87 1099 aa15.06■□□□□ 0
USP3-204ENST00000540797 C3orf67Q6ZVT6 689 aa15.06■□□□□ 0
USP3-204ENST00000540797 LRRC71Q8N4P6 559 aa15.06■□□□□ 0
USP3-204ENST00000540797 CALR3Q96L12 384 aaKnown RBP15.06■□□□□ 0
USP3-204ENST00000540797 C7orf25Q9BPX7 421 aa15.06■□□□□ 0
USP3-204ENST00000540797 KLC2Q9H0B6 622 aa15.06■□□□□ 0
USP3-204ENST00000540797 SLC16A3O15427 465 aaKnown RBP15.06■□□□□ 0
USP3-204ENST00000540797 APOEP02649 317 aa15.06■□□□□ 0
USP3-204ENST00000540797 FTLP02792 175 aaPredicted RBP15.06■□□□□ 0
USP3-204ENST00000540797 RASSF2P50749 326 aa15.06■□□□□ 0
USP3-204ENST00000540797 SLMAPQ14BN4 828 aa15.06■□□□□ 0
USP3-204ENST00000540797 TMED2Q15363 201 aa15.06■□□□□ 0
USP3-204ENST00000540797 FAM102AQ5T9C2 384 aaPredicted RBP15.06■□□□□ 0
USP3-204ENST00000540797 SPATA2LQ8IUW3 424 aaPredicted RBP15.06■□□□□ 0
USP3-204ENST00000540797 PPP2R3CQ969Q6 453 aa15.06■□□□□ 0
USP3-204ENST00000540797 RALAP11233 206 aa15.05■□□□□ 0
USP3-204ENST00000540797 PCGF5Q86SE9 256 aa15.05■□□□□ 0
USP3-204ENST00000540797 APPL2Q8NEU8 664 aa15.05■□□□□ 0
USP3-204ENST00000540797 EHD4Q9H223 541 aa15.05■□□□□ 0
USP3-204ENST00000540797 SNX9Q9Y5X1 595 aa15.05■□□□□ 0
USP3-204ENST00000540797 PLSCR1O15162 318 aa15.05■□□□□ -0
USP3-204ENST00000540797 METTL16Q86W50 562 aaKnown RBP15.05■□□□□ -0
USP3-204ENST00000540797 TTC25Q96NG3 672 aa15.05■□□□□ -0
USP3-204ENST00000540797 IP6K2Q9UHH9 426 aa15.05■□□□□ -0
USP3-204ENST00000540797 TAF6LQ9Y6J9 622 aa15.05■□□□□ -0
USP3-204ENST00000540797 DDTLA6NHG4 134 aaPredicted RBP15.05■□□□□ -0
USP3-204ENST00000540797 ITGA4P13612 1032 aa15.05■□□□□ -0
USP3-204ENST00000540797 SOX5P35711 763 aa15.05■□□□□ -0
USP3-204ENST00000540797 TCF7P36402 384 aaPredicted RBP15.05■□□□□ -0
USP3-204ENST00000540797 ARHGAP25P42331 645 aa15.05■□□□□ -0
USP3-204ENST00000540797 IL9RQ01113 521 aa15.05■□□□□ -0
USP3-204ENST00000540797 RBBP5Q15291 538 aaKnown RBP15.05■□□□□ -0
USP3-204ENST00000540797 EFHC2Q5JST6 749 aa15.05■□□□□ -0
USP3-204ENST00000540797 CACNA2D3Q8IZS8 1091 aa15.05■□□□□ -0
USP3-204ENST00000540797 TFRCP02786 760 aaKnown RBP15.05■□□□□ -0
USP3-204ENST00000540797 MT-ND3P03897 115 aa15.05■□□□□ -0
USP3-204ENST00000540797 MYBL1P10243 752 aa15.05■□□□□ -0
USP3-204ENST00000540797 ASPHQ12797 758 aa15.05■□□□□ -0
USP3-204ENST00000540797 FAM117BQ6P1L5 589 aa15.05■□□□□ -0
USP3-204ENST00000540797 TRIM62Q9BVG3 475 aa15.05■□□□□ -0
USP3-204ENST00000540797 BCAP29Q9UHQ4 241 aa15.05■□□□□ -0
USP3-204ENST00000540797 GRIK1P39086 918 aa15.04■□□□□ -0
USP3-204ENST00000540797 ADCY1Q08828 1119 aa15.04■□□□□ -0
USP3-204ENST00000540797 TROAPQ12815 778 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms