RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 SLC17A8Q8NDX2 589 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 TMEM161BQ8NDZ6 487 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 PRIMPOLQ96LW4 560 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 SLC9A7Q96T83 725 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 CCDC113Q9H0I3 377 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 AGPAT5Q9NUQ2 364 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 ARHGAP28Q9P2N2 729 aa17.07■□□□□ 0.32
DDB1-218ENST00000540784 ADGRA3Q8IWK6 1321 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 GOLGA6L22H0YM25 854 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 UPP2O95045 317 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 MYL1P05976 194 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 MAPTP10636 758 aaKnown RBP17.06■□□□□ 0.32
DDB1-218ENST00000540784 CASP1P29466 404 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 ABCD1P33897 745 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 NCKAP1LP55160 1127 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 DEFB103AP81534 67 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 AMHR2Q16671 573 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 NOTUMQ6P988 496 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 SFR1Q86XK3 245 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 LINC01599Q8WXQ3 324 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 TOP1MTQ969P6 601 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 CPB2Q96IY4 423 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 TIGD1Q96MW7 591 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 ZBED2Q9BTP6 218 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 MRPL44Q9H9J2 332 aaKnown RBP17.06■□□□□ 0.32
DDB1-218ENST00000540784 PCDHB7Q9Y5E2 793 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 TET1Q8NFU7 2136 aa17.06■□□□□ 0.32
DDB1-218ENST00000540784 A0A1B0GUA9 196 aa17.05■□□□□ 0.32
DDB1-218ENST00000540784 PVALEFA0A1B0GWK0 134 aa17.05■□□□□ 0.32
DDB1-218ENST00000540784 FRMD3A2A2Y4 597 aa17.05■□□□□ 0.32
DDB1-218ENST00000540784 C9IYK1 514 aa17.05■□□□□ 0.32
DDB1-218ENST00000540784 B4GALT5O43286 388 aa17.05■□□□□ 0.32
DDB1-218ENST00000540784 GTPBP6O43824 516 aaPredicted RBP17.05■□□□□ 0.32
DDB1-218ENST00000540784 NR1I2O75469 434 aa17.05■□□□□ 0.32
DDB1-218ENST00000540784 STAG3L1P0CL83 205 aa17.05■□□□□ 0.32
DDB1-218ENST00000540784 SKIP12755 728 aa17.05■□□□□ 0.32
DDB1-218ENST00000540784 ARF4P18085 180 aaPredicted RBP17.05■□□□□ 0.32
DDB1-218ENST00000540784 IBSPP21815 317 aaPredicted RBP17.05■□□□□ 0.32
DDB1-218ENST00000540784 NMT1P30419 496 aaKnown RBP17.05■□□□□ 0.32
DDB1-218ENST00000540784 SARSP49591 514 aaKnown RBP17.05■□□□□ 0.32
DDB1-218ENST00000540784 UNC13DQ70J99 1090 aa17.05■□□□□ 0.32
DDB1-218ENST00000540784 ZNF720Q7Z2F6 126 aa17.05■□□□□ 0.32
DDB1-218ENST00000540784 HERC6Q8IVU3 1022 aa17.05■□□□□ 0.32
DDB1-218ENST00000540784 CCDC51Q96ER9 411 aa17.05■□□□□ 0.32
DDB1-218ENST00000540784 TRAIPQ9BWF2 469 aa17.05■□□□□ 0.32
DDB1-218ENST00000540784 TBC1D7Q9P0N9 293 aa17.05■□□□□ 0.32
DDB1-218ENST00000540784 HOOK1Q9UJC3 728 aaKnown RBP17.05■□□□□ 0.32
DDB1-218ENST00000540784 LRFN2Q9ULH4 789 aa17.05■□□□□ 0.32
DDB1-218ENST00000540784 A0A0U1RQF3 1178 aa17.04■□□□□ 0.32
DDB1-218ENST00000540784 GRXCR1A8MXD5 290 aa17.04■□□□□ 0.32
DDB1-218ENST00000540784 K7ENM7 598 aa17.04■□□□□ 0.32
DDB1-218ENST00000540784 KINO60870 393 aaKnown RBP17.04■□□□□ 0.32
DDB1-218ENST00000540784 COASYQ13057 564 aa17.04■□□□□ 0.32
DDB1-218ENST00000540784 NT5DC1Q5TFE4 455 aa17.04■□□□□ 0.32
DDB1-218ENST00000540784 FAM117BQ6P1L5 589 aa17.04■□□□□ 0.32
DDB1-218ENST00000540784 TMCO2Q7Z6W1 182 aaPredicted RBP17.04■□□□□ 0.32
DDB1-218ENST00000540784 FIZ1Q96SL8 496 aa17.04■□□□□ 0.32
DDB1-218ENST00000540784 MRPL4Q9BYD3 311 aaKnown RBP17.04■□□□□ 0.32
DDB1-218ENST00000540784 ST6GALNAC4Q9H4F1 302 aa17.04■□□□□ 0.32
DDB1-218ENST00000540784 OLFML3Q9NRN5 406 aa17.04■□□□□ 0.32
DDB1-218ENST00000540784 TBX20Q9UMR3 447 aa17.04■□□□□ 0.32
DDB1-218ENST00000540784 USP20Q9Y2K6 914 aa17.04■□□□□ 0.32
DDB1-218ENST00000540784 PCDHB13Q9Y5F0 798 aa17.04■□□□□ 0.32
DDB1-218ENST00000540784 N4BP3O15049 544 aa17.03■□□□□ 0.32
DDB1-218ENST00000540784 EOMESO95936 686 aa17.03■□□□□ 0.32
DDB1-218ENST00000540784 GTF2BQ00403 316 aa17.03■□□□□ 0.32
DDB1-218ENST00000540784 LRIT3Q3SXY7 679 aa17.03■□□□□ 0.32
DDB1-218ENST00000540784 ZC2HC1CQ53FD0 456 aaPredicted RBP17.03■□□□□ 0.32
DDB1-218ENST00000540784 ATF7IP2Q5U623 682 aa17.03■□□□□ 0.32
DDB1-218ENST00000540784 TAS1R3Q7RTX0 852 aa17.03■□□□□ 0.32
DDB1-218ENST00000540784 ECHDC2Q86YB7 292 aa17.03■□□□□ 0.32
DDB1-218ENST00000540784 NPAS4Q8IUM7 802 aa17.03■□□□□ 0.32
DDB1-218ENST00000540784 KCNN1Q92952 543 aa17.03■□□□□ 0.32
DDB1-218ENST00000540784 CCDC47Q96A33 483 aaKnown RBP17.03■□□□□ 0.32
DDB1-218ENST00000540784 ACO2Q99798 780 aaKnown RBP17.03■□□□□ 0.32
DDB1-218ENST00000540784 ELAC1Q9H777 363 aaKnown RBP17.03■□□□□ 0.32
DDB1-218ENST00000540784 LMBRD1Q9NUN5 540 aa17.03■□□□□ 0.32
DDB1-218ENST00000540784 FAM105AQ9NUU6 356 aa17.03■□□□□ 0.32
DDB1-218ENST00000540784 PCDHB2Q9Y5E7 798 aa17.03■□□□□ 0.32
DDB1-218ENST00000540784 SIP14410 1827 aa17.03■□□□□ 0.32
DDB1-218ENST00000540784 CNTNAP2Q9UHC6 1331 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 TTLL13PA6NNM8 815 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 TLL1O43897 1013 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 ZNF623O75123 536 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 GJB5O95377 273 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 GCNT3O95395 438 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 RPN1P04843 607 aaKnown RBP17.02■□□□□ 0.32
DDB1-218ENST00000540784 RAB27AP51159 221 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 RABGGTBP53611 331 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 DPYDQ12882 1025 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 PSMD2Q13200 908 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 POSTNQ15063 836 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 UBXN11Q5T124 520 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 FAM109BQ6ICB4 259 aaPredicted RBP17.02■□□□□ 0.32
DDB1-218ENST00000540784 SLC27A1Q6PCB7 646 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 STXBP4Q6ZWJ1 553 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 APBB1IPQ7Z5R6 666 aaPredicted RBP17.02■□□□□ 0.32
DDB1-218ENST00000540784 CDR2LQ86X02 465 aaPredicted RBP17.02■□□□□ 0.32
DDB1-218ENST00000540784 ELOA2Q8IYF1 753 aaPredicted RBP17.02■□□□□ 0.32
DDB1-218ENST00000540784 RNF169Q8NCN4 708 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms