RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 KIAA1671Q9BY89 1806 aa11.53□□□□□ -0.56
CDCA3-208ENST00000540683 SPTBN5Q9NRC6 3674 aaKnown RBP11.52□□□□□ -0.56
CDCA3-208ENST00000540683 ARID2Q68CP9 1835 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 TMEM150BA6NC51 233 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 TULP1O00294 542 aaPredicted RBP11.52□□□□□ -0.57
CDCA3-208ENST00000540683 ZC3H11AO75152 810 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDCA3-208ENST00000540683 SEC24BO95487 1268 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 BMP15O95972 392 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 ALDH2P05091 517 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 ITGA4P13612 1032 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 ATF7P17544 494 aaPredicted RBP11.52□□□□□ -0.57
CDCA3-208ENST00000540683 NCLP19338 710 aaKnown RBP11.52□□□□□ -0.57
CDCA3-208ENST00000540683 PRPHP41219 470 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 TECP42680 631 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 GATMP50440 423 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 FXR2P51116 673 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDCA3-208ENST00000540683 FOSBP53539 338 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 DUSP6Q16828 381 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 TMEM132AQ24JP5 1023 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 EARS2Q5JPH6 523 aaKnown RBP11.52□□□□□ -0.57
CDCA3-208ENST00000540683 TMEM31Q5JXX7 168 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 CLLU1OSQ5K130 101 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 KRT79Q5XKE5 535 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 CES5AQ6NT32 575 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 SLC39A11Q8N1S5 342 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 KIFAP3Q92845 792 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 NECTIN4Q96NY8 510 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 SH2D3AQ9BRG2 576 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 ADPGKQ9BRR6 497 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 TIPINQ9BVW5 301 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 CSRNP2Q9H175 543 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 PRMT7Q9NVM4 692 aaPredicted RBP11.52□□□□□ -0.57
CDCA3-208ENST00000540683 DZANK1Q9NVP4 752 aa11.52□□□□□ -0.57
CDCA3-208ENST00000540683 MUC3AQ02505 3323 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 FSCN2O14926 492 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 MBTPS2O43462 519 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 SLC26A4O43511 780 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 PDCP20941 246 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 SCP2P22307 547 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 FGFR4P22455 802 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 ARL2P36404 184 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 CCT6AP40227 531 aaKnown RBP11.51□□□□□ -0.57
CDCA3-208ENST00000540683 BCAR1P56945 870 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 GUCY1B3Q02153 619 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 CREMQ03060 361 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 ITIH3Q06033 890 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 MAPK6Q16659 721 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 SLC27A1Q6PCB7 646 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 TMEM184AQ6ZMB5 413 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 DTHD1Q6ZMT9 781 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 DDX53Q86TM3 631 aaKnown RBP11.51□□□□□ -0.57
CDCA3-208ENST00000540683 CATSPER3Q86XQ3 398 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 KSR1Q8IVT5 923 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 MRPL43Q8N983 215 aaKnown RBP11.51□□□□□ -0.57
CDCA3-208ENST00000540683 SMRP1Q8NCR6 262 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 FAM212AQ96EL1 285 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 ZNF668Q96K58 619 aaPredicted RBP11.51□□□□□ -0.57
CDCA3-208ENST00000540683 EMILIN2Q9BXX0 1053 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 NT5C3AQ9H0P0 336 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 WRAP73Q9P2S5 460 aaPredicted RBP11.51□□□□□ -0.57
CDCA3-208ENST00000540683 DNM3Q9UQ16 869 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 GIT1Q9Y2X7 761 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 HCN4Q9Y3Q4 1203 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 ARIH1Q9Y4X5 557 aaPredicted RBP11.51□□□□□ -0.57
CDCA3-208ENST00000540683 GTF3C3Q9Y5Q9 886 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 IRAK3Q9Y616 596 aa11.51□□□□□ -0.57
CDCA3-208ENST00000540683 FAM205CA6NFA0 338 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 POTEMA6NI47 508 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 LRRIQ4A6NIV6 560 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 PI4K2BG5E9Z4 385 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 N4BP3O15049 544 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 DCXO43602 365 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 GPR37L1O60883 481 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 CSDE1O75534 798 aaKnown RBP11.5□□□□□ -0.57
CDCA3-208ENST00000540683 OFD1O75665 1012 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 C1RP00736 705 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 IL9P15248 144 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 CA8P35219 290 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 LTBRP36941 435 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 ZP2Q05996 745 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 CAMK1Q14012 370 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 ZNF174Q15697 407 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 FAM187BQ17R55 369 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 PLPP4Q5VZY2 271 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 MCTP1Q6DN14 999 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 RBM23Q86U06 439 aaKnown RBP11.5□□□□□ -0.57
CDCA3-208ENST00000540683 DEPTORQ8TB45 409 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 PIGOQ8TEQ8 1089 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 MSLNLQ96KJ4 702 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 DRC1Q96MC2 740 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 RIPOR3Q96MK2 946 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 RPS6KC1Q96S38 1066 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 POLR3FQ9H1D9 316 aaPredicted RBP11.5□□□□□ -0.57
CDCA3-208ENST00000540683 C17orf75Q9HAS0 396 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 TBC1D13Q9NVG8 400 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 SMC3Q9UQE7 1217 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 INPP5FQ9Y2H2 1132 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 FAN1Q9Y2M0 1017 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 NR2E1Q9Y466 385 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms