RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 MFSD14AQ96MC6 490 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 LRRC1Q9BTT6 524 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 TMEM117Q9H0C3 514 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 KMT5AQ9NQR1 393 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 CYP26B1Q9NR63 512 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 RBM12Q9NTZ6 932 aaKnown RBP10.37□□□□□ -0.75
LCOR-209ENST00000540664 RNF216Q9NWF9 866 aaPredicted RBP10.37□□□□□ -0.75
LCOR-209ENST00000540664 SMARCAL1Q9NZC9 954 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 DMGDHQ9UI17 866 aaKnown RBP10.37□□□□□ -0.75
LCOR-209ENST00000540664 TMEM59LQ9UK28 342 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 COQ4Q9Y3A0 265 aa10.37□□□□□ -0.75
LCOR-209ENST00000540664 LRRC37A2A6NM11 1700 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 ADGRA3Q8IWK6 1321 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 LRRIQ3A6PVS8 624 aaPredicted RBP10.36□□□□□ -0.75
LCOR-209ENST00000540664 EIF3JO75822 258 aaKnown RBP10.36□□□□□ -0.75
LCOR-209ENST00000540664 KIF4AO95239 1232 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 MYBL2P10244 700 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 YBX3P16989 372 aaKnown RBP eCLIP10.36□□□□□ -0.75
LCOR-209ENST00000540664 GCLMP48507 274 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 GALCP54803 685 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 PRKCEQ02156 737 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 TCEAL1Q15170 157 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 SNRNP35Q16560 246 aaKnown RBP10.36□□□□□ -0.75
LCOR-209ENST00000540664 XKR3Q5GH77 459 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 TREML2Q5T2D2 321 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 CCDC70Q6NSX1 233 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 MIS18BP1Q6P0N0 1132 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 RIOX2Q8IUF8 465 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 GLYCTKQ8IVS8 523 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 ARHGEF19Q8IW93 802 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 TMC2Q8TDI7 906 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 PARD3BQ8TEW8 1205 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 AENQ8WTP8 325 aaKnown RBP10.36□□□□□ -0.75
LCOR-209ENST00000540664 HDAC7Q8WUI4 952 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 MS4A14Q96JA4 679 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 SYT17Q9BSW7 474 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 ARHGAP28Q9P2N2 729 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 MAFBQ9Y5Q3 323 aaPredicted RBP10.36□□□□□ -0.75
LCOR-209ENST00000540664 SYNGAP1Q96PV0 1343 aa10.36□□□□□ -0.75
LCOR-209ENST00000540664 ZC3H4Q9UPT8 1303 aaKnown RBP10.36□□□□□ -0.75
LCOR-209ENST00000540664 IGKV6D-21A0A0A0MT36 114 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 CCDC169A6NNP5 214 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 LRRN2O75325 713 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 EDNRBP24530 442 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 ABCD1P33897 745 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 AARSP49588 968 aaKnown RBP eCLIP10.35□□□□□ -0.75
LCOR-209ENST00000540664 MXI1P50539 228 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 RPS6KA1Q15418 735 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 STXBP2Q15833 593 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 BRDTQ58F21 947 aaPredicted RBP10.35□□□□□ -0.75
LCOR-209ENST00000540664 DLK2Q6UY11 383 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 TAS1R3Q7RTX0 852 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 DNAAF5Q86Y56 855 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 CBWD2Q8IUF1 395 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 LMBR1Q8WVP7 490 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 PBKQ96KB5 322 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 KIFC3Q9BVG8 833 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 ATP6V0A4Q9HBG4 840 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 PDE11AQ9HCR9 933 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 UBE2TQ9NPD8 197 aaPredicted RBP10.35□□□□□ -0.75
LCOR-209ENST00000540664 FBXO40Q9UH90 709 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 PACSIN2Q9UNF0 486 aaPredicted RBP10.35□□□□□ -0.75
LCOR-209ENST00000540664 ADM5C9JUS6 153 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 ATP4AP20648 1035 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 GARTP22102 1010 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 SCP2P22307 547 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 GTF2H1P32780 548 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 SOX10P56693 466 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 PPATQ06203 517 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 ARHGAP44Q17R89 818 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 C9orf131Q5VYM1 1079 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.35□□□□□ -0.75
LCOR-209ENST00000540664 USP38Q8NB14 1042 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 ACTRT1Q8TDG2 376 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 CEP89Q96ST8 783 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 AGPAT1Q99943 283 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 BTBD7Q9P203 1132 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 STIM2Q9P246 746 aa10.35□□□□□ -0.75
LCOR-209ENST00000540664 SUCLA2Q9P2R7 463 aaPredicted RBP10.35□□□□□ -0.75
LCOR-209ENST00000540664 GOLGA8IPA6NC78 632 aa10.34□□□□□ -0.75
LCOR-209ENST00000540664 GOLGA8JA6NMD2 632 aa10.34□□□□□ -0.75
LCOR-209ENST00000540664 H0YCG3 227 aa10.34□□□□□ -0.75
LCOR-209ENST00000540664 IRF6O14896 467 aa10.34□□□□□ -0.75
LCOR-209ENST00000540664 ZMYND10O75800 440 aa10.34□□□□□ -0.75
LCOR-209ENST00000540664 NOP2P46087 812 aaKnown RBP10.34□□□□□ -0.75
LCOR-209ENST00000540664 ALDH5A1P51649 535 aaPredicted RBP10.34□□□□□ -0.75
LCOR-209ENST00000540664 GPC3P51654 580 aa10.34□□□□□ -0.75
LCOR-209ENST00000540664 HADHBP55084 474 aaKnown RBP10.34□□□□□ -0.75
LCOR-209ENST00000540664 FSTL1Q12841 308 aa10.34□□□□□ -0.75
LCOR-209ENST00000540664 KRT39Q6A163 491 aa10.34□□□□□ -0.75
LCOR-209ENST00000540664 TRMT1LQ7Z2T5 733 aaKnown RBP10.34□□□□□ -0.75
LCOR-209ENST00000540664 NT5DC3Q86UY8 548 aa10.34□□□□□ -0.75
LCOR-209ENST00000540664 PALB2Q86YC2 1186 aa10.34□□□□□ -0.75
LCOR-209ENST00000540664 FAM71AQ8IYT1 594 aa10.34□□□□□ -0.75
LCOR-209ENST00000540664 SYCE1Q8N0S2 351 aa10.34□□□□□ -0.75
LCOR-209ENST00000540664 PROCA1Q8NCQ7 364 aaPredicted RBP10.34□□□□□ -0.75
LCOR-209ENST00000540664 RFFLQ8WZ73 363 aa10.34□□□□□ -0.75
LCOR-209ENST00000540664 DCPSQ96C86 337 aaKnown RBP10.34□□□□□ -0.75
LCOR-209ENST00000540664 HES6Q96HZ4 224 aa10.34□□□□□ -0.75
LCOR-209ENST00000540664 ISCUQ9H1K1 167 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms