RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 GET4Q7L5D6 327 aaPredicted RBP7.14□□□□□ -1.27
MRE11-209ENST00000540013 CHST15Q7LFX5 561 aaPredicted RBP7.14□□□□□ -1.27
MRE11-209ENST00000540013 RASSF3Q86WH2 238 aa7.14□□□□□ -1.27
MRE11-209ENST00000540013 FAM43AQ8N2R8 423 aa7.14□□□□□ -1.27
MRE11-209ENST00000540013 ACRBPQ8NEB7 543 aa7.14□□□□□ -1.27
MRE11-209ENST00000540013 POF1BQ8WVV4 589 aa7.14□□□□□ -1.27
MRE11-209ENST00000540013 ALG3Q92685 438 aa7.14□□□□□ -1.27
MRE11-209ENST00000540013 FBXL7Q9UJT9 491 aa7.14□□□□□ -1.27
MRE11-209ENST00000540013 RIMS2Q9UQ26 1411 aa7.14□□□□□ -1.27
MRE11-209ENST00000540013 PTPN22Q9Y2R2 807 aa7.14□□□□□ -1.27
MRE11-209ENST00000540013 CHD2O14647 1828 aaKnown RBP7.13□□□□□ -1.27
MRE11-209ENST00000540013 ALKQ9UM73 1620 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 PLEKHG1Q9ULL1 1385 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 TCAF2A6NFQ2 919 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 B4E1Z4 1266 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 ARVCFO00192 962 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 WNT9AO14904 365 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 GNAT1P11488 350 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 TNFAIP3P21580 790 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 IARSP41252 1262 aaKnown RBP7.13□□□□□ -1.27
MRE11-209ENST00000540013 SCNN1BP51168 640 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 ALDH5A1P51649 535 aaPredicted RBP7.13□□□□□ -1.27
MRE11-209ENST00000540013 ERVK-21P61565 698 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 DLG4P78352 724 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 FAPQ12884 760 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 RGL3Q3MIN7 710 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 CFAP100Q494V2 611 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 FAM133BQ5BKY9 247 aaKnown RBP7.13□□□□□ -1.27
MRE11-209ENST00000540013 C1QTNF12Q5T7M4 302 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 IQSEC1Q6DN90 963 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 MZT2BQ6NZ67 158 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 CREBRFQ8IUR6 639 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 TRIM48Q8IWZ4 208 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.13□□□□□ -1.27
MRE11-209ENST00000540013 CDIP1Q9H305 208 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 SLC52A2Q9HAB3 445 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 SLC6A20Q9NP91 592 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 TRMT13Q9NUP7 481 aaKnown RBP7.13□□□□□ -1.27
MRE11-209ENST00000540013 MBD1Q9UIS9 605 aaPredicted RBP7.13□□□□□ -1.27
MRE11-209ENST00000540013 KIF1BO60333 1816 aa7.13□□□□□ -1.27
MRE11-209ENST00000540013 NWD1Q149M9 1564 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 HFM1A2PYH4 1435 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 N4BP3O15049 544 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 ORC4O43929 436 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 SNX2O60749 519 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 CRTAMO95727 393 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 AGR2O95994 175 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 NCAM1P13591 858 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 ZKSCAN1P17029 563 aaPredicted RBP7.12□□□□□ -1.27
MRE11-209ENST00000540013 ST5P78524 1137 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 ZNF200P98182 395 aaPredicted RBP7.12□□□□□ -1.27
MRE11-209ENST00000540013 UBE2R2Q712K3 238 aaPredicted RBP7.12□□□□□ -1.27
MRE11-209ENST00000540013 FGD2Q7Z6J4 655 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 MILR1Q7Z6M3 343 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 ANKRD23Q86SG2 305 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 SAPCD2Q86UD0 394 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 MYLK4Q86YV6 388 aaPredicted RBP7.12□□□□□ -1.27
MRE11-209ENST00000540013 ZC3H7AQ8IWR0 971 aaKnown RBP7.12□□□□□ -1.27
MRE11-209ENST00000540013 CMTR2Q8IYT2 770 aaKnown RBP7.12□□□□□ -1.27
MRE11-209ENST00000540013 TTC30BQ8N4P2 665 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 SPATA5Q8NB90 893 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 MZB1Q8WU39 189 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 FBXW5Q969U6 566 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 HSPBAP1Q96EW2 488 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 LRGUKQ96M69 825 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 ORAI3Q9BRQ5 295 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 NAA15Q9BXJ9 866 aaKnown RBP7.12□□□□□ -1.27
MRE11-209ENST00000540013 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.12□□□□□ -1.27
MRE11-209ENST00000540013 SMOC1Q9H4F8 434 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 CNTD2Q9H8S5 307 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 PCDH18Q9HCL0 1135 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 NMRK2Q9NPI5 230 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 SLC45A1Q9Y2W3 748 aa7.12□□□□□ -1.27
MRE11-209ENST00000540013 CTDP1Q9Y5B0 961 aaPredicted RBP7.12□□□□□ -1.27
MRE11-209ENST00000540013 NKTRP30414 1462 aaKnown RBP7.11□□□□□ -1.27
MRE11-209ENST00000540013 DISP3Q9P2K9 1392 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 IRS2Q9Y4H2 1338 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.11□□□□□ -1.27
MRE11-209ENST00000540013 A0A1W2PRQ8 180 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 hCG_1984214I3L0E3 225 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 M0R2C6 588 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 ETV2O00321 342 aaPredicted RBP7.11□□□□□ -1.27
MRE11-209ENST00000540013 MT-CO1P00395 513 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 HSPA6P17066 643 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 KCNA6P17658 529 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 RHCEP18577 417 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 RAP1GAPP47736 663 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 TM4SF4P48230 202 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 RXRGP48443 463 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 USP14P54578 494 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 RHDQ02161 417 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 KLF1Q13351 362 aaPredicted RBP7.11□□□□□ -1.27
MRE11-209ENST00000540013 PDCD2Q16342 344 aaPredicted RBP7.11□□□□□ -1.27
MRE11-209ENST00000540013 ZNF648Q5T619 568 aaPredicted RBP7.11□□□□□ -1.27
MRE11-209ENST00000540013 CDCA2Q69YH5 1023 aaPredicted RBP7.11□□□□□ -1.27
MRE11-209ENST00000540013 LDHAL6AQ6ZMR3 332 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 RSRC2Q7L4I2 434 aaKnown RBP7.11□□□□□ -1.27
MRE11-209ENST00000540013 OTOP3Q7RTS5 596 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 CATIPQ7Z7H3 387 aa7.11□□□□□ -1.27
MRE11-209ENST00000540013 ZC3H18Q86VM9 953 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms