RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 EFCC1Q9HA90 598 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 KCNH7Q9NS40 1196 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 KCND1Q9NSA2 647 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 VAV3Q9UKW4 847 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 PASKQ96RG2 1323 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 IGLV3-22A0A075B6J6 115 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 RSPH10B2B2RC85 870 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 CIB2O75838 187 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 DDNO94850 711 aaPredicted RBP10.75□□□□□ -0.69
TRAF1-202ENST00000540010 RSPH10BP0C881 870 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 BAATQ14032 418 aaPredicted RBP10.75□□□□□ -0.69
TRAF1-202ENST00000540010 GIT2Q14161 759 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 PSMD6Q15008 389 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 EPHA7Q15375 998 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 TMEM139Q8IV31 216 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 PALM2Q8IXS6 379 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 GDAP1Q8TB36 358 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 ZNF526Q8TF50 670 aaPredicted RBP10.75□□□□□ -0.69
TRAF1-202ENST00000540010 RUSC1Q9BVN2 902 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 KRT14P02533 472 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 FDX1P10109 184 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 GAP43P17677 238 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 GUCY2CP25092 1073 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 PSMC2P35998 433 aaKnown RBP10.75□□□□□ -0.69
TRAF1-202ENST00000540010 MAP3K10Q02779 954 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 SPIRE1Q08AE8 756 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 ZNF211Q13398 564 aaPredicted RBP10.75□□□□□ -0.69
TRAF1-202ENST00000540010 MUM1Q2TAK8 710 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 NUGGCQ68CJ6 796 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 NLRX1Q86UT6 975 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 CRYGNQ8WXF5 182 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 SLC5A5Q92911 643 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 ZNF653Q96CK0 615 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 FHOD1Q9Y613 1164 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 SIPA1L1O43166 1804 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 ATF2P15336 505 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 TMOD1P28289 359 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 MAGOHP61326 146 aaKnown RBP10.74□□□□□ -0.69
TRAF1-202ENST00000540010 COG2Q14746 738 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 MSANTD4Q8NCY6 345 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 NEK9Q8TD19 979 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 SYTL5Q8TDW5 730 aaPredicted RBP10.74□□□□□ -0.69
TRAF1-202ENST00000540010 DNAI2Q9GZS0 605 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 PARVGQ9HBI0 331 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 UBE2TQ9NPD8 197 aaPredicted RBP10.74□□□□□ -0.69
TRAF1-202ENST00000540010 RASGRF2O14827 1237 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 PSMD10O75832 226 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 PDE6CP51160 858 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 MYL7Q01449 175 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 PNKPQ96T60 521 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 CAPN11Q9UMQ6 739 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 C19orf81C9J6K1 198 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 VWA5AO00534 786 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 ZBTB39O15060 712 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 SLITRK3O94933 977 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 BAG2O95816 211 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 MYBP10242 640 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 SARNPP82979 210 aaKnown RBP10.74□□□□□ -0.69
TRAF1-202ENST00000540010 DR1Q01658 176 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 KCNH2Q12809 1159 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 KNOP1Q1ED39 458 aaKnown RBP10.74□□□□□ -0.69
TRAF1-202ENST00000540010 COBLL1Q53SF7 1204 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 SGO2Q562F6 1265 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 ARSHQ5FYA8 562 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 GADL1Q6ZQY3 521 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 IL31RAQ8NI17 732 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 SCFD1Q8WVM8 642 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 RIT2Q99578 217 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 FGFBP2Q9BYJ0 223 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 PGAP2Q9UHJ9 254 aa10.74□□□□□ -0.69
TRAF1-202ENST00000540010 HMGB1P1B2RPK0 211 aaPredicted RBP10.73□□□□□ -0.69
TRAF1-202ENST00000540010 TFRCP02786 760 aaKnown RBP10.73□□□□□ -0.69
TRAF1-202ENST00000540010 H2AFXP16104 143 aaPredicted RBP10.73□□□□□ -0.69
TRAF1-202ENST00000540010 RASSF2P50749 326 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 TKFCQ3LXA3 575 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 FBXW10Q5XX13 1052 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 RINT1Q6NUQ1 792 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 PBKQ96KB5 322 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 FHDC1Q9C0D6 1143 aaPredicted RBP10.73□□□□□ -0.69
TRAF1-202ENST00000540010 CPSF2Q9P2I0 782 aaKnown RBP10.73□□□□□ -0.69
TRAF1-202ENST00000540010 MYH7BA7E2Y1 1941 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 TROVE2P10155 538 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAF1-202ENST00000540010 HSD17B4P51659 736 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 PPP2R5CQ13362 524 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 PPP4R3CPQ6ZMV5 832 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 POMGNT1Q8WZA1 660 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 N4BP2L2Q92802 583 aaPredicted RBP10.73□□□□□ -0.69
TRAF1-202ENST00000540010 FUT8Q9BYC5 575 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 COL20A1Q9P218 1284 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 WDR91A4D1P6 747 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 ITGB5P18084 799 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 CCND2P30279 289 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 ZNF507Q8TCN5 953 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 RUNDC3BQ96NL0 473 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 C1orf112Q9NSG2 853 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 GREB1LQ9C091 1923 aaPredicted RBP10.73□□□□□ -0.69
TRAF1-202ENST00000540010 ZNF536O15090 1300 aa10.73□□□□□ -0.69
TRAF1-202ENST00000540010 RNF225M0QZC1 329 aaPredicted RBP10.72□□□□□ -0.69
TRAF1-202ENST00000540010 P4HBP07237 508 aaKnown RBP10.72□□□□□ -0.69
TRAF1-202ENST00000540010 NMT1P30419 496 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms