RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 NOTUMQ6P988 496 aa17.04■□□□□ 0.32
UBE3B-211ENST00000539843 HFE2Q6ZVN8 426 aa17.04■□□□□ 0.32
UBE3B-211ENST00000539843 DIS3L2Q8IYB7 885 aaKnown RBP17.04■□□□□ 0.32
UBE3B-211ENST00000539843 NECAB1Q8N987 351 aa17.04■□□□□ 0.32
UBE3B-211ENST00000539843 PBXIP1Q96AQ6 731 aa17.04■□□□□ 0.32
UBE3B-211ENST00000539843 EIF2AK1Q9BQI3 630 aaKnown RBP17.04■□□□□ 0.32
UBE3B-211ENST00000539843 TMEM175Q9BSA9 504 aa17.04■□□□□ 0.32
UBE3B-211ENST00000539843 APOL5Q9BWW9 433 aa17.04■□□□□ 0.32
UBE3B-211ENST00000539843 ZBP1Q9H171 429 aa17.04■□□□□ 0.32
UBE3B-211ENST00000539843 TTC12Q9H892 705 aaPredicted RBP17.04■□□□□ 0.32
UBE3B-211ENST00000539843 TSHZ2Q9NRE2 1034 aa17.04■□□□□ 0.32
UBE3B-211ENST00000539843 GJB4Q9NTQ9 266 aa17.04■□□□□ 0.32
UBE3B-211ENST00000539843 SSX2IPQ9Y2D8 614 aa17.04■□□□□ 0.32
UBE3B-211ENST00000539843 WDR81Q562E7 1941 aa17.04■□□□□ 0.32
UBE3B-211ENST00000539843 TMEM221A6NGB7 291 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 INO80B-WBP1J3KQ70 363 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 M0R296 226 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 CLASP2O75122 1294 aaKnown RBP17.03■□□□□ 0.32
UBE3B-211ENST00000539843 CTDNEP1O95476 244 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 ALDH2P05091 517 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 GALTP07902 379 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 ITGA4P13612 1032 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 HOXD11P31277 338 aaPredicted RBP17.03■□□□□ 0.32
UBE3B-211ENST00000539843 NEK4P51957 841 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 SIGLEC14Q08ET2 396 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 ME3Q16798 604 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 ATAT1Q5SQI0 421 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 SYCE2Q6PIF2 218 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 BMP8AQ7Z5Y6 402 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 CABP7Q86V35 215 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 S1PR5Q9H228 398 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 ADAM7Q9H2U9 754 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 NRDE2Q9H7Z3 1164 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 ANKEF1Q9NU02 776 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 FAN1Q9Y2M0 1017 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 IRAK3Q9Y616 596 aa17.03■□□□□ 0.32
UBE3B-211ENST00000539843 LYPLA2O95372 231 aa17.02■□□□□ 0.32
UBE3B-211ENST00000539843 TXKP42681 527 aa17.02■□□□□ 0.32
UBE3B-211ENST00000539843 GNL2Q13823 731 aaKnown RBP17.02■□□□□ 0.32
UBE3B-211ENST00000539843 NSUN7Q8NE18 718 aaKnown RBP17.02■□□□□ 0.32
UBE3B-211ENST00000539843 ERMNQ8TAM6 284 aa17.02■□□□□ 0.32
UBE3B-211ENST00000539843 WRAP73Q9P2S5 460 aaPredicted RBP17.02■□□□□ 0.32
UBE3B-211ENST00000539843 DPP7Q9UHL4 492 aa17.02■□□□□ 0.32
UBE3B-211ENST00000539843 SLITRK3O94933 977 aa17.01■□□□□ 0.31
UBE3B-211ENST00000539843 URODP06132 367 aa17.01■□□□□ 0.31
UBE3B-211ENST00000539843 NCLP19338 710 aaKnown RBP17.01■□□□□ 0.31
UBE3B-211ENST00000539843 SLC11A1P49279 550 aa17.01■□□□□ 0.31
UBE3B-211ENST00000539843 FOSBP53539 338 aa17.01■□□□□ 0.31
UBE3B-211ENST00000539843 POU5F1BQ06416 359 aa17.01■□□□□ 0.31
UBE3B-211ENST00000539843 SPIRE1Q08AE8 756 aa17.01■□□□□ 0.31
UBE3B-211ENST00000539843 PTPN21Q16825 1174 aa17.01■□□□□ 0.31
UBE3B-211ENST00000539843 EARS2Q5JPH6 523 aaKnown RBP17.01■□□□□ 0.31
UBE3B-211ENST00000539843 MRPL10Q7Z7H8 261 aaKnown RBP17.01■□□□□ 0.31
UBE3B-211ENST00000539843 ZNF579Q8NAF0 562 aaKnown RBP17.01■□□□□ 0.31
UBE3B-211ENST00000539843 TDRD5Q8NAT2 981 aaKnown RBP17.01■□□□□ 0.31
UBE3B-211ENST00000539843 MRPL17Q9NRX2 175 aaKnown RBP17.01■□□□□ 0.31
UBE3B-211ENST00000539843 DBR1Q9UK59 544 aaKnown RBP17.01■□□□□ 0.31
UBE3B-211ENST00000539843 BTBD18B2RXH4 712 aa17■□□□□ 0.31
UBE3B-211ENST00000539843 FDPSP14324 419 aaKnown RBP17■□□□□ 0.31
UBE3B-211ENST00000539843 SP100P23497 879 aaPredicted RBP17■□□□□ 0.31
UBE3B-211ENST00000539843 KLRC2P26717 231 aa17■□□□□ 0.31
UBE3B-211ENST00000539843 PTENP60484 403 aa17■□□□□ 0.31
UBE3B-211ENST00000539843 RARS2Q5T160 578 aaKnown RBP17■□□□□ 0.31
UBE3B-211ENST00000539843 AGMOQ6ZNB7 445 aa17■□□□□ 0.31
UBE3B-211ENST00000539843 SFXN1Q9H9B4 322 aa17■□□□□ 0.31
UBE3B-211ENST00000539843 DNAJB4Q9UDY4 337 aa17■□□□□ 0.31
UBE3B-211ENST00000539843 FAM205CA6NFA0 338 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 MEIS3P2A8K0S8 358 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 POMCP01189 267 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 XRCC6P12956 609 aaKnown RBP eCLIP16.99■□□□□ 0.31
UBE3B-211ENST00000539843 HOXA11P31270 313 aaPredicted RBP16.99■□□□□ 0.31
UBE3B-211ENST00000539843 ORC2Q13416 577 aaPredicted RBP16.99■□□□□ 0.31
UBE3B-211ENST00000539843 MTMR3Q13615 1198 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 TMEM132AQ24JP5 1023 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 KIAA1841Q6NSI8 718 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 TMEM173Q86WV6 379 aaPredicted RBP16.99■□□□□ 0.31
UBE3B-211ENST00000539843 ZBTB8OSQ8IWT0 167 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 UBALD2Q8IYN6 164 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 PLCD3Q8N3E9 789 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 MCPH1Q8NEM0 835 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 AUTS2Q8WXX7 1259 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 TNFRSF25Q93038 417 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 ACSF2Q96CM8 615 aaPredicted RBP16.99■□□□□ 0.31
UBE3B-211ENST00000539843 FBXL18Q96ME1 805 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 HSD17B14Q9BPX1 270 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 CSRNP2Q9H175 543 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 MINDY3Q9H8M7 445 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 IPPQ9Y573 584 aa16.99■□□□□ 0.31
UBE3B-211ENST00000539843 TSPAN1O60635 241 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 USO1O60763 962 aaKnown RBP16.98■□□□□ 0.31
UBE3B-211ENST00000539843 SSBP05455 408 aaKnown RBP eCLIP16.98■□□□□ 0.31
UBE3B-211ENST00000539843 ATP2B1P20020 1258 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 MCM7P33993 719 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 OR1G1P47890 313 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 PTPN5P54829 565 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 PTPN14Q15678 1187 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 ZNF280BQ86YH2 543 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 IFNLR1Q8IU57 520 aaPredicted RBP16.98■□□□□ 0.31
UBE3B-211ENST00000539843 FBXL6Q8N531 539 aa16.98■□□□□ 0.31
UBE3B-211ENST00000539843 FAM184AQ8NB25 1140 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms