RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SPDYE4A6NLX3 237 aa16.73■□□□□ 0.27
USB1-203ENST00000539737 JAK2O60674 1132 aa16.73■□□□□ 0.27
USB1-203ENST00000539737 POMCP01189 267 aa16.73■□□□□ 0.27
USB1-203ENST00000539737 CFHP08603 1231 aa16.73■□□□□ 0.27
USB1-203ENST00000539737 SPATA31D3P0C874 917 aa16.73■□□□□ 0.27
USB1-203ENST00000539737 CIITAP33076 1130 aa16.73■□□□□ 0.27
USB1-203ENST00000539737 HMGN5P82970 282 aaKnown RBP16.73■□□□□ 0.27
USB1-203ENST00000539737 NOMO2Q5JPE7 1267 aa16.73■□□□□ 0.27
USB1-203ENST00000539737 SPATA31D4Q6ZUB0 917 aa16.73■□□□□ 0.27
USB1-203ENST00000539737 DDX53Q86TM3 631 aaKnown RBP16.73■□□□□ 0.27
USB1-203ENST00000539737 BLIDQ8IZY5 108 aa16.73■□□□□ 0.27
USB1-203ENST00000539737 RIN2Q8WYP3 895 aaPredicted RBP16.73■□□□□ 0.27
USB1-203ENST00000539737 SLC5A5Q92911 643 aa16.73■□□□□ 0.27
USB1-203ENST00000539737 NKD2Q969F2 451 aaPredicted RBP16.73■□□□□ 0.27
USB1-203ENST00000539737 B3GALT6Q96L58 329 aa16.73■□□□□ 0.27
USB1-203ENST00000539737 PHF20Q9BVI0 1012 aa16.73■□□□□ 0.27
USB1-203ENST00000539737 MRPL9Q9BYD2 267 aaKnown RBP16.73■□□□□ 0.27
USB1-203ENST00000539737 NRBP2Q9NSY0 501 aa16.73■□□□□ 0.27
USB1-203ENST00000539737 FAM105AQ9NUU6 356 aa16.73■□□□□ 0.27
USB1-203ENST00000539737 SUCLA2Q9P2R7 463 aaPredicted RBP16.73■□□□□ 0.27
USB1-203ENST00000539737 FRYLO94915 3013 aa16.72■□□□□ 0.27
USB1-203ENST00000539737 CACNA1AO00555 2505 aa16.72■□□□□ 0.27
USB1-203ENST00000539737 RNASELQ05823 741 aaKnown RBP16.72■□□□□ 0.27
USB1-203ENST00000539737 TRIM29Q14134 588 aa16.72■□□□□ 0.27
USB1-203ENST00000539737 POTEGQ6S5H5 508 aa16.72■□□□□ 0.27
USB1-203ENST00000539737 AGMOQ6ZNB7 445 aa16.72■□□□□ 0.27
USB1-203ENST00000539737 MIER3Q7Z3K6 550 aa16.72■□□□□ 0.27
USB1-203ENST00000539737 GPR149Q86SP6 731 aa16.72■□□□□ 0.27
USB1-203ENST00000539737 GCOM2Q9BZD3 368 aaPredicted RBP16.72■□□□□ 0.27
USB1-203ENST00000539737 MINDY3Q9H8M7 445 aa16.72■□□□□ 0.27
USB1-203ENST00000539737 KCNK12Q9HB15 430 aa16.72■□□□□ 0.27
USB1-203ENST00000539737 BRMS1Q9HCU9 246 aa16.72■□□□□ 0.27
USB1-203ENST00000539737 CYP26B1Q9NR63 512 aa16.72■□□□□ 0.27
USB1-203ENST00000539737 DZANK1Q9NVP4 752 aa16.72■□□□□ 0.27
USB1-203ENST00000539737 FBXL21Q9UKT6 434 aa16.72■□□□□ 0.27
USB1-203ENST00000539737 PRG3Q9Y2Y8 225 aaPredicted RBP16.72■□□□□ 0.27
USB1-203ENST00000539737 R4GN57 208 aa16.72■□□□□ 0.27
USB1-203ENST00000539737 DOCK6Q96HP0 2047 aa16.72■□□□□ 0.27
USB1-203ENST00000539737 KRBA1A5PL33 1030 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 DDX11L8A8MPP1 907 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 RFPL2O75678 378 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 FDPSP14324 419 aaKnown RBP16.71■□□□□ 0.27
USB1-203ENST00000539737 KLRC2P26717 231 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 CLCN4P51793 760 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 NPEPPSP55786 919 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 ANGPT1Q15389 498 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 GLB1LQ6UWU2 654 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 FAM43BQ6ZT52 329 aaPredicted RBP16.71■□□□□ 0.27
USB1-203ENST00000539737 CCDC149Q6ZUS6 474 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 CATSPER4Q7RTX7 472 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 RABGGTAQ92696 567 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 TEKT3Q9BXF9 490 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 SFXN1Q9H9B4 322 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 MARCH5Q9NX47 278 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 DACT1Q9NYF0 836 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 CACNG4Q9UBN1 327 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 CA14Q9ULX7 337 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 NCOR2Q9Y618 2525 aa16.71■□□□□ 0.27
USB1-203ENST00000539737 GPR179Q6PRD1 2367 aa16.71■□□□□ 0.26
USB1-203ENST00000539737 DOCK8Q8NF50 2099 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 EML1O00423 815 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 PSMD10O75832 226 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 AOC1P19801 751 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 USP11P51784 963 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 CLCN5P51795 746 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 TDGQ13569 410 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 NPY5RQ15761 445 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 SPECC1Q5M775 1068 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 UBXN11Q5T124 520 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 ANO5Q75V66 913 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 KRT25Q7Z3Z0 450 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 GLYCTKQ8IVS8 523 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 CCDC105Q8IYK2 499 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 DTWD2Q8NBA8 298 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 TBCKQ8TEA7 893 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 TMEM143Q96AN5 459 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 TMX3Q96JJ7 454 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 MYADMQ96S97 322 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 IRF2BPLQ9H1B7 796 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 RNF39Q9H2S5 420 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 MAN1C1Q9NR34 630 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 WRAP73Q9P2S5 460 aaPredicted RBP16.7■□□□□ 0.26
USB1-203ENST00000539737 KCNJ14Q9UNX9 436 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 PCDHB2Q9Y5E7 798 aa16.7■□□□□ 0.26
USB1-203ENST00000539737 CEP250Q9BV73 2442 aa16.69■□□□□ 0.26
USB1-203ENST00000539737 IGKV6-21A0A0C4DH24 114 aa16.69■□□□□ 0.26
USB1-203ENST00000539737 M0R2N6 131 aa16.69■□□□□ 0.26
USB1-203ENST00000539737 CD2BP2O95400 341 aaKnown RBP16.69■□□□□ 0.26
USB1-203ENST00000539737 SFPQP23246 707 aaKnown RBP eCLIP16.69■□□□□ 0.26
USB1-203ENST00000539737 NONOQ15233 471 aaKnown RBP eCLIP16.69■□□□□ 0.26
USB1-203ENST00000539737 FAM184AQ8NB25 1140 aa16.69■□□□□ 0.26
USB1-203ENST00000539737 IFT122Q9HBG6 1241 aa16.69■□□□□ 0.26
USB1-203ENST00000539737 DUSP12Q9UNI6 340 aa16.69■□□□□ 0.26
USB1-203ENST00000539737 USTQ9Y2C2 406 aa16.69■□□□□ 0.26
USB1-203ENST00000539737 KIF3AQ9Y496 699 aa16.69■□□□□ 0.26
USB1-203ENST00000539737 HES2Q9Y543 173 aa16.69■□□□□ 0.26
USB1-203ENST00000539737 IRAK3Q9Y616 596 aa16.69■□□□□ 0.26
USB1-203ENST00000539737 CCDC194A0A1B0GVG4 234 aa16.68■□□□□ 0.26
USB1-203ENST00000539737 STK25O00506 426 aa16.68■□□□□ 0.26
USB1-203ENST00000539737 NRP1O14786 923 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms