RNA–Protein interactions for RNA: ENST00000539722.5

PRKCQ-203, Transcript of protein kinase C theta, humanhuman

TSL 2 BASIC

Gene PRKCQ, Length 3,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-203ENST00000539722 PHTF1Q9UMS5 762 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 NUMBLQ9Y6R0 609 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 BCORQ6W2J9 1755 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 FAM187AA6NFU0 413 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 SIGLEC16A6NMB1 481 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 BTNL10A8MVZ5 291 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 TOM1O60784 492 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 CALCRLQ16602 461 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 ACSBG2Q5FVE4 666 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 BTNL9Q6UXG8 535 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 CAPN12Q6ZSI9 719 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 VPS36Q86VN1 386 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 RAD54LQ92698 747 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 CTTNBP2NLQ9P2B4 639 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 COG5Q9UP83 839 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 A0A1W2PRG0 241 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 E9PMD0 336 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 SKIV2L2P42285 1042 aaKnown RBP13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 WDR4P57081 412 aaKnown RBP13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 TMED2Q15363 201 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 SPDYCQ5MJ68 293 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 C1QTNF12Q5T7M4 302 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 CTNNBL1Q8WYA6 563 aaPredicted RBP13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 DYNLL2Q96FJ2 89 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 PLA2G12BQ9BX93 195 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 CARD9Q9H257 536 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 IKZF4Q9H2S9 585 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 SLAIN2Q9P270 581 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 PITPNM2Q9BZ72 1349 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 E7ENQ6 273 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 BAG3O95817 575 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 CASP5P51878 434 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 DHX34Q14147 1143 aaKnown RBP13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 HP1BP3Q5SSJ5 553 aaPredicted RBP13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 C10orf76Q5T2E6 689 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 LRRC74BQ6ZQY2 392 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 SCYL3Q8IZE3 742 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 TRAPPC9Q96Q05 1148 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 TUBGCP5Q96RT8 1024 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 DMAP1Q9NPF5 467 aaPredicted RBP13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 USP20Q9Y2K6 914 aa13.08□□□□□ -0.32
PRKCQ-203ENST00000539722 WDR91A4D1P6 747 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 LAD1O00515 517 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 PFDN1O60925 122 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 PHF2O75151 1096 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 CHRNB2P17787 502 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 MARK3P27448 753 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 CDR2Q01850 454 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 CALCOCO2Q13137 446 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 C4orf50Q6ZRC1 276 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 HS2ST1Q7LGA3 356 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 MTDHQ86UE4 582 aaKnown RBP13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 WDR60Q8WVS4 1066 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 C1orf54Q8WWF1 131 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 C9orf72Q96LT7 481 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 MAGEB18Q96M61 343 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 UBN1Q9NPG3 1134 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.07□□□□□ -0.327e-8■■■■■ 186.3
PRKCQ-203ENST00000539722 A6NJR5 290 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 MAPK13O15264 365 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 VCAM1P19320 739 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 RTP1P59025 263 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 OVGP1Q12889 678 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 GIT2Q14161 759 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 COBLL1Q53SF7 1204 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 MFSD5Q6N075 450 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 PROM2Q8N271 834 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 SCFD1Q8WVM8 642 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 DNAJC1Q96KC8 554 aaKnown RBP13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 BCAS3Q9H6U6 928 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 ZWILCHQ9H900 591 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 AAASQ9NRG9 546 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 CCDC87Q9NVE4 849 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 BARHL2Q9NY43 387 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 GCNT4Q9P109 453 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 ASIC3Q9UHC3 531 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 ZNF232Q9UNY5 417 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 ALG6Q9Y672 507 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 CFAP69A5D8W1 941 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 RASA4BC9J798 803 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 RASA4O43374 803 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 THAP12O43422 761 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 MARCH6O60337 910 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 CASP4P49662 377 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 BPIFB4P59827 614 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 PPP2R5CQ13362 524 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 CCDC152Q4G0S7 254 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 ACBD5Q5T8D3 534 aaPredicted RBP13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 KRT79Q5XKE5 535 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 CYP4F22Q6NT55 531 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 ARHGEF18Q6ZSZ5 1173 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 C4orf33Q8N1A6 199 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 DNAJC19Q96DA6 116 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 CYTH2Q99418 400 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 CADM1Q9BY67 442 aaKnown RBP13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 NPHS2Q9NP85 383 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 IL17RBQ9NRM6 502 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
PRKCQ-203ENST00000539722 NAALADL1Q9UQQ1 740 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms