RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 INO80B-WBP1J3KQ70 363 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 PRKCBP05771 671 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 TPM3P06753 285 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 TPM2P07951 284 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 GPC3P51654 580 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 COPB1P53618 953 aaKnown RBP17.69■□□□□ 0.42
TRAF3-204ENST00000539721 NLRP11P59045 1033 aaKnown RBP17.69■□□□□ 0.42
TRAF3-204ENST00000539721 MAPK6Q16659 721 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 FILIP1LQ4L180 1135 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 GDF6Q6KF10 455 aaPredicted RBP17.69■□□□□ 0.42
TRAF3-204ENST00000539721 FBXO46Q6PJ61 603 aaPredicted RBP17.69■□□□□ 0.42
TRAF3-204ENST00000539721 SESTD1Q86VW0 696 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 SLC9A9Q8IVB4 645 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 C12orf56Q8IXR9 622 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 DNAJB3Q8WWF6 145 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 GLT1D1Q96MS3 346 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 DEFB118Q96PH6 123 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 NFKBIZQ9BYH8 718 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 INO80BQ9C086 356 aaPredicted RBP17.69■□□□□ 0.42
TRAF3-204ENST00000539721 VPS16Q9H269 839 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 PCIF1Q9H4Z3 704 aa17.69■□□□□ 0.42
TRAF3-204ENST00000539721 SLC16A3O15427 465 aaKnown RBP17.68■□□□□ 0.42
TRAF3-204ENST00000539721 EPB41P11171 864 aaKnown RBP17.68■□□□□ 0.42
TRAF3-204ENST00000539721 PRKCSHP14314 528 aaPredicted RBP17.68■□□□□ 0.42
TRAF3-204ENST00000539721 CDC42EP1Q00587 391 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 TMEM62Q0P6H9 643 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 ITGA7Q13683 1181 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 MYBPC2Q14324 1141 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 SLC39A4Q6P5W5 647 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 ZNF410Q86VK4 478 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 CBWD1Q9BRT8 395 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 TUBGCP2Q9BSJ2 902 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 IFT122Q9HBG6 1241 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 DMAC2Q9NW81 257 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 GRIN2DO15399 1336 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 A0A1B0GTH6 734 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 LRRC10BA6NIK2 292 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 EXOC3O60645 756 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 AKAP3O75969 853 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 PIGRP01833 764 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 EDN1P05305 212 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 CASP4P49662 377 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 MBTD1Q05BQ5 628 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 TAF2Q6P1X5 1199 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 IFNLR1Q8IU57 520 aaPredicted RBP17.68■□□□□ 0.42
TRAF3-204ENST00000539721 PDLIM2Q96JY6 352 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 MRPL4Q9BYD3 311 aaKnown RBP17.68■□□□□ 0.42
TRAF3-204ENST00000539721 HSPBP1Q9NZL4 362 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 USP20Q9Y2K6 914 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 FRMD4BQ9Y2L6 1034 aa17.68■□□□□ 0.42
TRAF3-204ENST00000539721 A0A1W2PQ45 241 aaPredicted RBP17.67■□□□□ 0.42
TRAF3-204ENST00000539721 A0A1W2PQY0 241 aa17.67■□□□□ 0.42
TRAF3-204ENST00000539721 PES1O00541 588 aaKnown RBP17.67■□□□□ 0.42
TRAF3-204ENST00000539721 N4BP3O15049 544 aa17.67■□□□□ 0.42
TRAF3-204ENST00000539721 CDC25BP30305 580 aa17.67■□□□□ 0.42
TRAF3-204ENST00000539721 PSMC2P35998 433 aaKnown RBP17.67■□□□□ 0.42
TRAF3-204ENST00000539721 MARSP56192 900 aaKnown RBP17.67■□□□□ 0.42
TRAF3-204ENST00000539721 KIZQ2M2Z5 673 aa17.67■□□□□ 0.42
TRAF3-204ENST00000539721 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.67■□□□□ 0.42
TRAF3-204ENST00000539721 DRC7Q8IY82 874 aa17.67■□□□□ 0.42
TRAF3-204ENST00000539721 TMEM174Q8WUU8 243 aa17.67■□□□□ 0.42
TRAF3-204ENST00000539721 POMGNT1Q8WZA1 660 aa17.67■□□□□ 0.42
TRAF3-204ENST00000539721 MKNK1Q9BUB5 465 aa17.67■□□□□ 0.42
TRAF3-204ENST00000539721 NOC4LQ9BVI4 516 aaKnown RBP17.67■□□□□ 0.42
TRAF3-204ENST00000539721 TARS2Q9BW92 718 aaKnown RBP17.67■□□□□ 0.42
TRAF3-204ENST00000539721 FZD8Q9H461 694 aa17.67■□□□□ 0.42
TRAF3-204ENST00000539721 MINDY3Q9H8M7 445 aa17.67■□□□□ 0.42
TRAF3-204ENST00000539721 PRMT7Q9NVM4 692 aaPredicted RBP17.67■□□□□ 0.42
TRAF3-204ENST00000539721 PHF24Q9UPV7 400 aa17.67■□□□□ 0.42
TRAF3-204ENST00000539721 GARTP22102 1010 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 ADSSP30520 456 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 PTPN11Q06124 597 aaPredicted RBP17.66■□□□□ 0.42
TRAF3-204ENST00000539721 PKN2Q16513 984 aaKnown RBP17.66■□□□□ 0.42
TRAF3-204ENST00000539721 MAN2A1Q16706 1144 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 ZPBP2Q6X784 338 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 SRGAP1Q7Z6B7 1085 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 FRMD5Q7Z6J6 570 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 FAM186BQ8IYM0 893 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 NME8Q8N427 588 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 XXYLT1Q8NBI6 393 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 PPP1R9BQ96SB3 815 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 ADAMTS10Q9H324 1103 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 METTL14Q9HCE5 456 aaKnown RBP17.66■□□□□ 0.42
TRAF3-204ENST00000539721 RTN4Q9NQC3 1192 aaKnown RBP17.66■□□□□ 0.42
TRAF3-204ENST00000539721 STARD7Q9NQZ5 370 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 INTS13Q9NVM9 706 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 ARMCX3Q9UH62 379 aaPredicted RBP17.66■□□□□ 0.42
TRAF3-204ENST00000539721 GINS2Q9Y248 185 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 DNM1LO00429 736 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 ACKR2O00590 384 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 GPR32O75388 356 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 MATR3P43243 847 aaKnown RBP eCLIP17.66■□□□□ 0.42
TRAF3-204ENST00000539721 PRPF4BQ13523 1007 aaKnown RBP17.66■□□□□ 0.42
TRAF3-204ENST00000539721 NR1I3Q14994 352 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 TMEM132AQ24JP5 1023 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 SLFN12LQ6IEE8 588 aa17.66■□□□□ 0.42
TRAF3-204ENST00000539721 GCOM2Q9BZD3 368 aaPredicted RBP17.66■□□□□ 0.42
TRAF3-204ENST00000539721 CSDE1O75534 798 aaKnown RBP17.65■□□□□ 0.42
TRAF3-204ENST00000539721 PTGISQ16647 500 aa17.65■□□□□ 0.42
TRAF3-204ENST00000539721 FAM187BQ17R55 369 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms