RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 ACP6Q9NPH0 428 aa21.91■■□□□ 1.1
TMEM260-203ENST00000539559 STK32BQ9NY57 414 aa21.91■■□□□ 1.1
TMEM260-203ENST00000539559 CTTNBP2NLQ9P2B4 639 aa21.91■■□□□ 1.1
TMEM260-203ENST00000539559 HGSO14964 777 aaPredicted RBP21.9■■□□□ 1.1
TMEM260-203ENST00000539559 CREB1P16220 341 aa21.9■■□□□ 1.1
TMEM260-203ENST00000539559 BMT2Q1RMZ1 405 aa21.9■■□□□ 1.1
TMEM260-203ENST00000539559 MBOAT7Q96N66 472 aa21.9■■□□□ 1.1
TMEM260-203ENST00000539559 CAMKK2Q96RR4 588 aa21.9■■□□□ 1.1
TMEM260-203ENST00000539559 AGAP1Q9UPQ3 857 aa21.9■■□□□ 1.1
TMEM260-203ENST00000539559 NUDT17P0C025 328 aa21.9■■□□□ 1.1
TMEM260-203ENST00000539559 PTGIRP43119 386 aa21.9■■□□□ 1.1
TMEM260-203ENST00000539559 UBXN2AP68543 259 aa21.9■■□□□ 1.1
TMEM260-203ENST00000539559 SLFN13Q68D06 897 aa21.9■■□□□ 1.1
TMEM260-203ENST00000539559 ARMC9Q7Z3E5 817 aa21.9■■□□□ 1.1
TMEM260-203ENST00000539559 CRYGNQ8WXF5 182 aa21.9■■□□□ 1.1
TMEM260-203ENST00000539559 DNAJC18Q9H819 358 aa21.9■■□□□ 1.1
TMEM260-203ENST00000539559 VAV3Q9UKW4 847 aa21.9■■□□□ 1.1
TMEM260-203ENST00000539559 SUFUQ9UMX1 484 aa21.9■■□□□ 1.1
TMEM260-203ENST00000539559 ATP6V1G2O95670 118 aa21.89■■□□□ 1.1
TMEM260-203ENST00000539559 MESDQ14696 234 aa21.89■■□□□ 1.1
TMEM260-203ENST00000539559 HOOK2Q96ED9 719 aa21.89■■□□□ 1.1
TMEM260-203ENST00000539559 NAP1L4Q99733 375 aaKnown RBP21.89■■□□□ 1.1
TMEM260-203ENST00000539559 NOD2Q9HC29 1040 aa21.89■■□□□ 1.1
TMEM260-203ENST00000539559 TISP43B9A030 160 aa21.89■■□□□ 1.09
TMEM260-203ENST00000539559 DNAJC8O75937 253 aaPredicted RBP21.89■■□□□ 1.09
TMEM260-203ENST00000539559 ZNF76P36508 570 aa21.89■■□□□ 1.09
TMEM260-203ENST00000539559 MAEAQ7L5Y9 396 aa21.89■■□□□ 1.09
TMEM260-203ENST00000539559 SMCHD1A6NHR9 2005 aa21.89■■□□□ 1.09
TMEM260-203ENST00000539559 MGRN1O60291 552 aa21.88■■□□□ 1.09
TMEM260-203ENST00000539559 ANXA13P27216 316 aa21.88■■□□□ 1.09
TMEM260-203ENST00000539559 DLG4P78352 724 aa21.88■■□□□ 1.09
TMEM260-203ENST00000539559 PODNQ7Z5L7 613 aa21.88■■□□□ 1.09
TMEM260-203ENST00000539559 FAM212AQ96EL1 285 aa21.88■■□□□ 1.09
TMEM260-203ENST00000539559 DNAJC17Q9NVM6 304 aaKnown RBP21.88■■□□□ 1.09
TMEM260-203ENST00000539559 TRPC6Q9Y210 931 aa21.88■■□□□ 1.09
TMEM260-203ENST00000539559 L3MBTL1Q9Y468 752 aa21.88■■□□□ 1.09
TMEM260-203ENST00000539559 CCDC169A6NNP5 214 aa21.88■■□□□ 1.09
TMEM260-203ENST00000539559 FTLP02792 175 aaPredicted RBP21.88■■□□□ 1.09
TMEM260-203ENST00000539559 TAX1BP1Q86VP1 789 aa21.88■■□□□ 1.09
TMEM260-203ENST00000539559 ANKS4BQ8N8V4 417 aa21.88■■□□□ 1.09
TMEM260-203ENST00000539559 CCDC63Q8NA47 563 aa21.88■■□□□ 1.09
TMEM260-203ENST00000539559 PGM2Q96G03 612 aa21.88■■□□□ 1.09
TMEM260-203ENST00000539559 DYDC2Q96IM9 177 aa21.88■■□□□ 1.09
TMEM260-203ENST00000539559 GTPBP10A4D1E9 387 aaKnown RBP21.87■■□□□ 1.09
TMEM260-203ENST00000539559 LONRF1Q17RB8 773 aa21.87■■□□□ 1.09
TMEM260-203ENST00000539559 CDC42EP5Q6NZY7 148 aa21.87■■□□□ 1.09
TMEM260-203ENST00000539559 CCDC137Q6PK04 289 aaKnown RBP21.87■■□□□ 1.09
TMEM260-203ENST00000539559 PIGWQ7Z7B1 504 aa21.87■■□□□ 1.09
TMEM260-203ENST00000539559 KAT5Q92993 513 aa21.87■■□□□ 1.09
TMEM260-203ENST00000539559 CENPTQ96BT3 561 aa21.87■■□□□ 1.09
TMEM260-203ENST00000539559 DDX23Q9BUQ8 820 aaKnown RBP21.87■■□□□ 1.09
TMEM260-203ENST00000539559 PCIF1Q9H4Z3 704 aa21.87■■□□□ 1.09
TMEM260-203ENST00000539559 APEX2Q9UBZ4 518 aa21.87■■□□□ 1.09
TMEM260-203ENST00000539559 EYA4O95677 639 aa21.87■■□□□ 1.09
TMEM260-203ENST00000539559 MYL7Q01449 175 aa21.87■■□□□ 1.09
TMEM260-203ENST00000539559 CNKSR1Q969H4 720 aa21.87■■□□□ 1.09
TMEM260-203ENST00000539559 STAMBPL1Q96FJ0 436 aa21.87■■□□□ 1.09
TMEM260-203ENST00000539559 SAMD15Q9P1V8 674 aa21.87■■□□□ 1.09
TMEM260-203ENST00000539559 ANKRD62A6NC57 917 aa21.86■■□□□ 1.09
TMEM260-203ENST00000539559 FAM187AA6NFU0 413 aa21.86■■□□□ 1.09
TMEM260-203ENST00000539559 PHF2O75151 1096 aa21.86■■□□□ 1.09
TMEM260-203ENST00000539559 PYGMP11217 842 aa21.86■■□□□ 1.09
TMEM260-203ENST00000539559 EZRP15311 586 aaKnown RBP21.86■■□□□ 1.09
TMEM260-203ENST00000539559 COMTP21964 271 aa21.86■■□□□ 1.09
TMEM260-203ENST00000539559 ELMO3Q96BJ8 720 aa21.86■■□□□ 1.09
TMEM260-203ENST00000539559 UBE2TQ9NPD8 197 aaPredicted RBP21.86■■□□□ 1.09
TMEM260-203ENST00000539559 GDF11O95390 407 aa21.86■■□□□ 1.09
TMEM260-203ENST00000539559 GHRP10912 638 aa21.86■■□□□ 1.09
TMEM260-203ENST00000539559 KCNJ2P63252 427 aa21.86■■□□□ 1.09
TMEM260-203ENST00000539559 Q4G0T1 1027 aa21.86■■□□□ 1.09
TMEM260-203ENST00000539559 ARHGEF19Q8IW93 802 aa21.86■■□□□ 1.09
TMEM260-203ENST00000539559 NAP1L3Q99457 506 aaPredicted RBP21.86■■□□□ 1.09
TMEM260-203ENST00000539559 AGPAT1Q99943 283 aa21.86■■□□□ 1.09
TMEM260-203ENST00000539559 DBNDD1Q9H9R9 158 aa21.86■■□□□ 1.09
TMEM260-203ENST00000539559 ACSL3O95573 720 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 CHRNA5P30532 468 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 DHX34Q14147 1143 aaKnown RBP21.85■■□□□ 1.09
TMEM260-203ENST00000539559 TBC1D10BQ4KMP7 808 aaPredicted RBP21.85■■□□□ 1.09
TMEM260-203ENST00000539559 TRPM8Q7Z2W7 1104 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 CCDC105Q8IYK2 499 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 VEZTQ9HBM0 779 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 AGPAT3Q9NRZ7 376 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 CTNNAL1Q9UBT7 734 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 RASAL2Q9UJF2 1139 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 FRMPD4Q14CM0 1322 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 RASGRF2O14827 1237 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 RIPK2O43353 540 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 UBOX5O94941 541 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 ADCY1Q08828 1119 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 AUHQ13825 339 aaKnown RBP21.85■■□□□ 1.09
TMEM260-203ENST00000539559 OLFML3Q9NRN5 406 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 WRAP73Q9P2S5 460 aaPredicted RBP21.85■■□□□ 1.09
TMEM260-203ENST00000539559 SLC12A4Q9UP95 1085 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 SRCAPQ6ZRS2 3230 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 ADAMTSL1Q8N6G6 1762 aa21.85■■□□□ 1.09
TMEM260-203ENST00000539559 HHIPL2Q6UWX4 724 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 C1orf186Q6ZWK4 172 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 RPUSD2Q8IZ73 545 aaKnown RBP21.84■■□□□ 1.09
TMEM260-203ENST00000539559 SPICE1Q8N0Z3 855 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 ZSWIM2Q8NEG5 633 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms