RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 GALNT18Q6P9A2 607 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 CATIPQ7Z7H3 387 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 IGDCC3Q8IVU1 814 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 NDUFAF2Q8N183 169 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 MSL3Q8N5Y2 521 aaKnown RBP4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 PTPRN2Q92932 1015 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 VWCEQ96DN2 955 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 WNK4Q96J92 1243 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 LOXL4Q96JB6 756 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 MAP6Q96JE9 813 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 SGCZQ96LD1 299 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 FGD4Q96M96 766 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 SEZ6LQ9BYH1 1024 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 KMT5AQ9NQR1 393 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 FEZ2Q9UHY8 353 aaPredicted RBP4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 GJD2Q9UKL4 321 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 FBXL21Q9UKT6 434 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 ZKSCAN5Q9Y2L8 839 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 TNPO3Q9Y5L0 923 aaKnown RBP4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 COL22A1Q8NFW1 1626 aaPredicted RBP4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 ASXL1Q8IXJ9 1541 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 CENPFP49454 3210 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 CLSPNQ9HAW4 1339 aa4.46□□□□□ -1.7
AC055720.1-201ENST00000539552 NKTRP30414 1462 aaKnown RBP4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 hCG_1642624A0A1W2PR95 340 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 NUDT19A8MXV4 375 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 AQP7O14520 342 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 GAS7O60861 476 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 TMCC2O75069 709 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 C6P13671 934 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 CAPN3P20807 821 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 SCP2P22307 547 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 POLR2BP30876 1174 aaKnown RBP4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 IARSP41252 1262 aaKnown RBP4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 MAPK9P45984 424 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 ID4P47928 161 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 USP14P54578 494 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 NCKAP1LP55160 1127 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 ERVFRD-1P60508 538 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 ERVK-21P61565 698 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 CAP1Q01518 475 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 TRIM14Q14142 442 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 TARBP2Q15633 366 aaKnown RBP4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 NBPF12Q5TAG4 269 aaPredicted RBP4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 YOD1Q5VVQ6 348 aaPredicted RBP4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 FAM180BQ6P0A1 224 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 BRINP3Q76B58 766 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 MAMDC2Q7Z304 686 aaPredicted RBP4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 BRAPQ7Z569 592 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 SRGAP1Q7Z6B7 1085 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 ZNF227Q86WZ6 799 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 SLC41A1Q8IVJ1 513 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 CMTR2Q8IYT2 770 aaKnown RBP4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 TP53I13Q8NBR0 393 aaPredicted RBP4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 IPO4Q8TEX9 1081 aaKnown RBP4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 TRIM63Q969Q1 353 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 ACSF2Q96CM8 615 aaPredicted RBP4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 HSPBAP1Q96EW2 488 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 CDHR1Q96JP9 859 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 LRGUKQ96M69 825 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 CRB3Q9BUF7 120 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 ASPNQ9BXN1 380 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 UNC45AQ9H3U1 944 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 CABP5Q9NP86 173 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 NMRK2Q9NPI5 230 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 PDP2Q9P2J9 529 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 EBF1Q9UH73 591 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 ISY1Q9ULR0 285 aaKnown RBP4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 GPR52Q9Y2T5 361 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 AFG3L2Q9Y4W6 797 aa4.45□□□□□ -1.7
AC055720.1-201ENST00000539552 ZNF518AQ6AHZ1 1483 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 LAMA3Q16787 3333 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 A0A1W2PQ27 194 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 A0A1W2PQ64 194 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 A0A1W2PQC6 194 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 A0A1W2PQD8 194 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 WTIPA6NIX2 430 aaPredicted RBP4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 CYR61O00622 381 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 FFAR3O14843 346 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 FOXN1O15353 648 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 MBD4O95243 580 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 KCNH1O95259 989 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 CPP00450 1065 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 SNRPB2P08579 225 aaKnown RBP4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 CNR2P34972 360 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 FXR1P51114 621 aaKnown RBP eCLIP4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 APBA1Q02410 837 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 BTKQ06187 659 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 ZNF460Q14592 562 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 SEPT2Q15019 361 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 NBPF9Q3BBW0 867 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 FAAH2Q6GMR7 532 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 TLDC1Q6P9B6 456 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 MTDHQ86UE4 582 aaKnown RBP4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 SKAP1Q86WV1 359 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 FTSJ3Q8IY81 847 aaKnown RBP4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 GSTCDQ8NEC7 633 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 DEPTORQ8TB45 409 aa4.44□□□□□ -1.7
AC055720.1-201ENST00000539552 NELL1Q92832 810 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms