RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 EPB41L4AQ9HCS5 686 aaPredicted RBP15.52■□□□□ 0.07
CACNB1-206ENST00000539338 AAASQ9NRG9 546 aa15.52■□□□□ 0.07
CACNB1-206ENST00000539338 PPP1R9AQ9ULJ8 1098 aa15.52■□□□□ 0.07
CACNB1-206ENST00000539338 NEURL4Q96JN8 1562 aa15.52■□□□□ 0.07
CACNB1-206ENST00000539338 A0A0G2JND7 137 aa15.52■□□□□ 0.07
CACNB1-206ENST00000539338 IQANK1A0A1B0GTG1 560 aa15.52■□□□□ 0.07
CACNB1-206ENST00000539338 NCF2P19878 526 aaPredicted RBP15.52■□□□□ 0.07
CACNB1-206ENST00000539338 ADSSL1Q8N142 457 aa15.52■□□□□ 0.07
CACNB1-206ENST00000539338 LINC00116Q8NCU8 138 aa15.52■□□□□ 0.07
CACNB1-206ENST00000539338 AGPAT5Q9NUQ2 364 aa15.52■□□□□ 0.07
CACNB1-206ENST00000539338 MAGEA9P43362 315 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 SPOPLQ6IQ16 392 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 MCPH1Q8NEM0 835 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 SYT17Q9BSW7 474 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 MYOZ2Q9NPC6 264 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 TUBE1Q9UJT0 475 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 GRID2IPA4D2P6 1211 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 TTC36A6NLP5 189 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 CSPG5O95196 566 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 CASP2P42575 452 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 COG1Q8WTW3 980 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 FNDC3AQ9Y2H6 1198 aaKnown RBP15.51■□□□□ 0.07
CACNB1-206ENST00000539338 IPO5O00410 1097 aaKnown RBP15.51■□□□□ 0.07
CACNB1-206ENST00000539338 TRPA1O75762 1119 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 CLEC10AQ8IUN9 316 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 TMEM35BQ8NCS4 154 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 OR6B3Q8NGW1 331 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 DDX27Q96GQ7 796 aaKnown RBP15.51■□□□□ 0.07
CACNB1-206ENST00000539338 FAM49AQ9H0Q0 323 aaPredicted RBP15.51■□□□□ 0.07
CACNB1-206ENST00000539338 TBC1D22BQ9NU19 505 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 FEM1BQ9UK73 627 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 PFDN6O15212 129 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 MAPK13O15264 365 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 KRT3P12035 628 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 QARSP47897 775 aaKnown RBP15.51■□□□□ 0.07
CACNB1-206ENST00000539338 SPP2Q13103 211 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 NR1I3Q14994 352 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 GPRC5AQ8NFJ5 357 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 PPWD1Q96BP3 646 aaKnown RBP15.51■□□□□ 0.07
CACNB1-206ENST00000539338 RGL1Q9NZL6 768 aa15.51■□□□□ 0.07
CACNB1-206ENST00000539338 DLC1Q96QB1 1528 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 P4HBP07237 508 aaKnown RBP15.5■□□□□ 0.07
CACNB1-206ENST00000539338 NMT1P30419 496 aaKnown RBP15.5■□□□□ 0.07
CACNB1-206ENST00000539338 PPP2R2AP63151 447 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 SPARCL1Q14515 664 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 PLCB4Q15147 1175 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 RAD9BQ6WBX8 426 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 TC2NQ8N9U0 490 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 RBM41Q96IZ5 413 aaKnown RBP15.5■□□□□ 0.07
CACNB1-206ENST00000539338 MS4A14Q96JA4 679 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 CCSER1Q9C0I3 900 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 MSRAQ9UJ68 235 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 EMSYQ7Z589 1322 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 SNRNP48Q6IEG0 339 aaKnown RBP15.5■□□□□ 0.07
CACNB1-206ENST00000539338 MYLK4Q86YV6 388 aaPredicted RBP15.5■□□□□ 0.07
CACNB1-206ENST00000539338 SPDL1Q96EA4 605 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 AMACRQ9UHK6 382 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 CD163L1Q9NR16 1453 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 STX1BP61266 288 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 THOC5Q13769 683 aaKnown RBP15.5■□□□□ 0.07
CACNB1-206ENST00000539338 MAP1SQ66K74 1059 aaPredicted RBP15.5■□□□□ 0.07
CACNB1-206ENST00000539338 ZNF668Q96K58 619 aaPredicted RBP15.5■□□□□ 0.07
CACNB1-206ENST00000539338 GABBR1Q9UBS5 961 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 FBXL5Q9UKA1 691 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 SLC8A2Q9UPR5 921 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 SMIM24O75264 130 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 CYP2B6P20813 491 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 SSTR3P32745 418 aaPredicted RBP15.5■□□□□ 0.07
CACNB1-206ENST00000539338 RFX5P48382 616 aaPredicted RBP15.5■□□□□ 0.07
CACNB1-206ENST00000539338 ARL4CP56559 192 aa15.5■□□□□ 0.07
CACNB1-206ENST00000539338 STK4Q13043 487 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 SWSAP1Q6NVH7 229 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 LRRC43Q8N309 656 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 PDZD8Q8NEN9 1154 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 SLITRK6Q9H5Y7 841 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 SNX12Q9UMY4 172 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 PXDNLA1KZ92 1463 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 NEXMIFQ5QGS0 1516 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 GMNCA6NCL1 334 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 USP11P51784 963 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 GRIN1Q05586 938 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 ZNF699Q32M78 642 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 HEY1Q9Y5J3 304 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 CLGNO14967 610 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 CFLARO15519 480 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 SOX5P35711 763 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 LRRC14Q15048 493 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 EPM2AIP1Q7L775 607 aaPredicted RBP15.49■□□□□ 0.07
CACNB1-206ENST00000539338 ATP6V1G3Q96LB4 118 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 PCSK1NQ9UHG2 260 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 CSF1RP07333 972 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 KRT76Q01546 638 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 CCDC137Q6PK04 289 aaKnown RBP15.49■□□□□ 0.07
CACNB1-206ENST00000539338 RASGRP2Q7LDG7 609 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 C1orf54Q8WWF1 131 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 RNF146Q9NTX7 359 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 USH1CQ9Y6N9 552 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 ATP8B3O60423 1300 aa15.49■□□□□ 0.07
CACNB1-206ENST00000539338 SRGNP10124 158 aa15.48■□□□□ 0.07
CACNB1-206ENST00000539338 STXBP2Q15833 593 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms