RNA–Protein interactions for RNA: ENST00000538859.1

NPIPB4-209, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-209ENST00000538859 C2orf27AQ580R0 203 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 BRDTQ58F21 947 aaPredicted RBP2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 FIGNQ5HY92 759 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 L1TD1Q5T7N2 865 aaKnown RBP2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 HECTD2Q5U5R9 776 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 KLHDC10Q6PID8 442 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 NIM1KQ8IY84 436 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 GPATCH11Q8N954 259 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 STAG1Q8WVM7 1258 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 PPM1EQ8WY54 764 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 TSR2Q969E8 191 aaKnown RBP2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 SLC7A6OSQ96CW6 309 aaPredicted RBP2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 MTMR8Q96EF0 704 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 MFSD3Q96ES6 412 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 MLST8Q9BVC4 326 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 CYP4F11Q9HBI6 524 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 AASDHPPTQ9NRN7 309 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 RNF7Q9UBF6 113 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 SFMBT1Q9UHJ3 866 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 CD2APQ9Y5K6 639 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 COX11Q9Y6N1 276 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 ASXL2Q76L83 1435 aa2.22□□□□□ -2.05
NPIPB4-209ENST00000538859 TRAV20A0A0B4J274 112 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 UBE2QL1A1L167 161 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 PRAMEF22A3QJZ6 481 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 C2orf78A6NCI8 922 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 AQP7O14520 342 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 GSTA4O15217 222 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 MAFGO15525 162 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 MMEP08473 750 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 PYGMP11217 842 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 NR4A1P22736 598 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 APEX1P27695 318 aaKnown RBP2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 GNALP38405 381 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 PPM1FP49593 454 aaPredicted RBP2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 BPIFB4P59827 614 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 ITKQ08881 620 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 MAP3K12Q12852 859 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 TTF1Q15361 905 aaPredicted RBP2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 MAP9Q49MG5 647 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 C4orf46Q504U0 113 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 FKBP15Q5T1M5 1219 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 SYCP2LQ5T4T6 812 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 MFSD5Q6N075 450 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 KCNV1Q6PIU1 500 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 HTR3DQ70Z44 454 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 HDGFL2Q7Z4V5 671 aaPredicted RBP2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 KIAA0907Q7Z7F0 614 aaPredicted RBP2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 C11orf96Q7Z7L8 435 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 ZBTB46Q86UZ6 589 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 CHPFQ8IZ52 775 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 FAM9BQ8IZU0 186 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 BCL6BQ8N143 479 aaPredicted RBP2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 MYO1HQ8N1T3 1032 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 LILRB2Q8N423 598 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 UBR7Q8N806 425 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 ZSWIM2Q8NEG5 633 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 PCDH19Q8TAB3 1148 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 CALML6Q8TD86 181 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 ATXN2LQ8WWM7 1075 aaKnown RBP2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 GCDHQ92947 438 aaPredicted RBP2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 TRIM63Q969Q1 353 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 GFM2Q969S9 779 aaKnown RBP2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 GBP4Q96PP9 640 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 GPHA2Q96T91 129 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 CDC6Q99741 560 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 TCF25Q9BQ70 676 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 ZHX3Q9H4I2 956 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 CAAP1Q9H8G2 361 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 KANSL2Q9H9L4 492 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 ARHGEF4Q9NR80 690 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 TMEM260Q9NX78 707 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 SAE1Q9UBE0 346 aaPredicted RBP2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 CBLCQ9ULV8 474 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 TRAF6Q9Y4K3 522 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 HS3ST4Q9Y661 456 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 PTCH2Q9Y6C5 1203 aa2.21□□□□□ -2.06
NPIPB4-209ENST00000538859 CNTNAP2Q9UHC6 1331 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 GRXCR1A8MXD5 290 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 GOLGA6L22H0YM25 854 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 ZNF561-AS1K7EIQ3 104 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 KCNK3O14649 394 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 TCERG1O14776 1098 aaKnown RBP2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 TSPAN6O43657 245 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 PDE8AO60658 829 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 MAFO75444 373 aaPredicted RBP2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 SCGB1D2O95969 90 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 SRGAP2CP0DJJ0 459 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 CCND1P24385 295 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 CLK3P49761 638 aaKnown RBP2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 CDKN1CP49918 316 aaPredicted RBP2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 USP14P54578 494 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 LACTBP83111 547 aaPredicted RBP2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 PICALMQ13492 652 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 SQSTM1Q13501 440 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 HLTFQ14527 1009 aaKnown RBP eCLIP2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 DHX8Q14562 1220 aaKnown RBP2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 SEC23AQ15436 765 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 TKFCQ3LXA3 575 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 TIGD2Q4W5G0 525 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms