RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 ZMYM2Q9UBW7 1377 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 MTCL1Q9Y4B5 1905 aaKnown RBP15.16■□□□□ 0.02
CD9-208ENST00000538834 ACKR2O00590 384 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 B4GALT5O43286 388 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 HIP1RO75146 1068 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 OFD1O75665 1012 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 PLCG1P19174 1290 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 NPTX2P47972 431 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 ZNF131P52739 623 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 KARSQ15046 597 aaKnown RBP15.16■□□□□ 0.02
CD9-208ENST00000538834 PPP2R5AQ15172 486 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 GDPD5Q8WTR4 605 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 SPIRE2Q8WWL2 714 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 RAD54LQ92698 747 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 FIZ1Q96SL8 496 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 C2orf40Q9H1Z8 148 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 TMEM134Q9H6X4 195 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 TYW1Q9NV66 732 aaKnown RBP15.16■□□□□ 0.02
CD9-208ENST00000538834 PRMT7Q9NVM4 692 aaPredicted RBP15.16■□□□□ 0.02
CD9-208ENST00000538834 TFIP11Q9UBB9 837 aaKnown RBP15.16■□□□□ 0.02
CD9-208ENST00000538834 RCOR1Q9UKL0 485 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 PCDHB2Q9Y5E7 798 aa15.16■□□□□ 0.02
CD9-208ENST00000538834 A0A087X0B3 334 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 INO80B-WBP1J3KQ70 363 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 EFNA5P52803 228 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 SPECC1Q5M775 1068 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 TWF2Q6IBS0 349 aaKnown RBP15.15■□□□□ 0.02
CD9-208ENST00000538834 NOTUMQ6P988 496 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 KRI1Q8N9T8 703 aaKnown RBP15.15■□□□□ 0.02
CD9-208ENST00000538834 CNNM3Q8NE01 707 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 SPPL3Q8TCT6 385 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 SYMPKQ92797 1274 aaKnown RBP15.15■□□□□ 0.02
CD9-208ENST00000538834 MRPL38Q96DV4 380 aaKnown RBP15.15■□□□□ 0.02
CD9-208ENST00000538834 CALML4Q96GE6 196 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 DRC1Q96MC2 740 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 ZNF396Q96N95 335 aaPredicted RBP15.15■□□□□ 0.02
CD9-208ENST00000538834 PLIN2Q99541 437 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 EIF2AQ9BY44 585 aaKnown RBP15.15■□□□□ 0.02
CD9-208ENST00000538834 LMAN2LQ9H0V9 348 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 PTPRHQ9HD43 1115 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 HCSTQ9UBK5 93 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 STK17AQ9UEE5 414 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 ODF2LQ9ULJ1 636 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 PLAGL2Q9UPG8 496 aa15.15■□□□□ 0.02
CD9-208ENST00000538834 VWA8A3KMH1 1905 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 LRRIQ4A6NIV6 560 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 TBKBP1A7MCY6 615 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 ABLIM1O14639 778 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 SPTLC2O15270 562 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 ERLIN2O94905 339 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 ITGB1P05556 798 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 DNAJB1P25685 340 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 CEBPZQ03701 1054 aaKnown RBP15.14■□□□□ 0.01
CD9-208ENST00000538834 GPM6BQ13491 265 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 GIT2Q14161 759 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 PAN2Q504Q3 1202 aaKnown RBP15.14■□□□□ 0.01
CD9-208ENST00000538834 NT5DC1Q5TFE4 455 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 GSTCDQ8NEC7 633 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 LPPQ93052 612 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 CPB2Q96IY4 423 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 MTUS1Q9ULD2 1270 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 IPPQ9Y573 584 aa15.14■□□□□ 0.01
CD9-208ENST00000538834 TCF20Q9UGU0 1960 aaKnown RBP15.13■□□□□ 0.01
CD9-208ENST00000538834 GRM6O15303 877 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 EFEMP2O95967 443 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 HSP90AA1P07900 732 aaKnown RBP15.13■□□□□ 0.01
CD9-208ENST00000538834 PLS3P13797 630 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 PROZP22891 400 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 CTNNB1P35222 781 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 AFF1P51825 1210 aaKnown RBP15.13■□□□□ 0.01
CD9-208ENST00000538834 NCKAP1LP55160 1127 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 PEX3P56589 373 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 PLCB3Q01970 1234 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 MCM6Q14566 821 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 E2F4Q16254 413 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 MAPK6Q16659 721 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 SLC27A1Q6PCB7 646 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 ZBTB8OSQ8IWT0 167 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 KLHL23Q8NBE8 558 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 COLGALT1Q8NBJ5 622 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 SPRYD3Q8NCJ5 442 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 TMEM161BQ8NDZ6 487 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 HELQQ8TDG4 1101 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 LARP4BQ92615 738 aaKnown RBP15.13■□□□□ 0.01
CD9-208ENST00000538834 DNAJC19Q96DA6 116 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 PGBD4Q96DM1 585 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 IFT74Q96LB3 600 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 C11orf84Q9BUA3 381 aaPredicted RBP15.13■□□□□ 0.01
CD9-208ENST00000538834 KIFC3Q9BVG8 833 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 RNF39Q9H2S5 420 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 PDZD7Q9H5P4 517 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 KCNG1Q9UIX4 513 aa15.13■□□□□ 0.01
CD9-208ENST00000538834 RBM19Q9Y4C8 960 aaKnown RBP15.13■□□□□ 0.01
CD9-208ENST00000538834 NPHP3-ACAD11A0A0J9YXS1 232 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 SFI1A8K8P3 1242 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 B4GALT3O60512 393 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 CUTAO60888 179 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 PRKCBP05771 671 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 UBE3AQ05086 875 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 EEF1DP3Q658K8 133 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms