RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 FRMD4BQ9Y2L6 1034 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 FAN1Q9Y2M0 1017 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 PTCH2Q9Y6C5 1203 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 WDR81Q562E7 1941 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 SIP14410 1827 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 RANBP2P49792 3224 aaKnown RBP10.04□□□□□ -0.8
DDB1-211ENST00000538280 LCTP09848 1927 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 K7ENM7 598 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 RPS6KA5O75582 802 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 ZMYND10O75800 440 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 ALAS1P13196 640 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 VCAM1P19320 739 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 SFNP31947 248 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 JAK3P52333 1124 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 HADHBP55084 474 aaKnown RBP10.04□□□□□ -0.8
DDB1-211ENST00000538280 NAP1L1P55209 391 aaKnown RBP10.04□□□□□ -0.8
DDB1-211ENST00000538280 PPATQ06203 517 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 ENPEPQ07075 957 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 MTMR1Q13613 665 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 DRAP1Q14919 205 aaPredicted RBP10.04□□□□□ -0.8
DDB1-211ENST00000538280 RPS6KA1Q15418 735 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 EPC2Q52LR7 807 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 INTS8Q75QN2 995 aaKnown RBP10.04□□□□□ -0.8
DDB1-211ENST00000538280 GSPT2Q8IYD1 628 aaKnown RBP10.04□□□□□ -0.8
DDB1-211ENST00000538280 MREGQ8N565 214 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 USP38Q8NB14 1042 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 SLC17A8Q8NDX2 589 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 ACTRT1Q8TDG2 376 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 SCFD2Q8WU76 684 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 BRI3BPQ8WY22 251 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 OPTNQ96CV9 577 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 ZNF333Q96JL9 665 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 MS4A4AQ96JQ5 239 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 CALR3Q96L12 384 aaKnown RBP10.04□□□□□ -0.8
DDB1-211ENST00000538280 PSMB7Q99436 277 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 SH3GL2Q99962 352 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 RAVER2Q9HCJ3 691 aaKnown RBP10.04□□□□□ -0.8
DDB1-211ENST00000538280 PXMP2Q9NR77 195 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 VPS18Q9P253 973 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 SUCLA2Q9P2R7 463 aaPredicted RBP10.04□□□□□ -0.8
DDB1-211ENST00000538280 COLQQ9Y215 455 aaPredicted RBP10.04□□□□□ -0.8
DDB1-211ENST00000538280 A0A0G2JMZ2 1700 aa10.04□□□□□ -0.8
DDB1-211ENST00000538280 TRIOBPQ9H2D6 2365 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 TESPA1A2RU30 521 aaPredicted RBP10.03□□□□□ -0.8
DDB1-211ENST00000538280 CCDC66A2RUB6 948 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 DDX39AO00148 427 aaKnown RBP10.03□□□□□ -0.8
DDB1-211ENST00000538280 MGAMO43451 1857 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 EXOC3O60645 756 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 ZBED4O75132 1171 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 ECM2O94769 699 aaPredicted RBP10.03□□□□□ -0.8
DDB1-211ENST00000538280 CCNE2O96020 404 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 CCDC172P0C7W6 258 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 TRIM49P0CI25 452 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 TRIM49CP0CI26 452 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 TNNT3P45378 269 aaPredicted RBP10.03□□□□□ -0.8
DDB1-211ENST00000538280 CYP2J2P51589 502 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 OAZ1P54368 228 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 PSMC5P62195 406 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 RPS6P62753 249 aaKnown RBP10.03□□□□□ -0.8
DDB1-211ENST00000538280 KRT76Q01546 638 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 SP3Q02447 781 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 UGCGQ16739 394 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 HSP90B2PQ58FF3 399 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 TAF3Q5VWG9 929 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 PHLDB3Q6NSJ2 640 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.03□□□□□ -0.8
DDB1-211ENST00000538280 NT5DC3Q86UY8 548 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 IFT20Q8IY31 132 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 SYCE1Q8N0S2 351 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 LMBR1Q8WVP7 490 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.03□□□□□ -0.8
DDB1-211ENST00000538280 TAF4BQ92750 862 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 KCNN1Q92952 543 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 GPRASP2Q96D09 838 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 HES6Q96HZ4 224 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 IWS1Q96ST2 819 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 RPAP3Q9H6T3 665 aaPredicted RBP10.03□□□□□ -0.8
DDB1-211ENST00000538280 EFCC1Q9HA90 598 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 TTC7AQ9ULT0 858 aaPredicted RBP10.03□□□□□ -0.8
DDB1-211ENST00000538280 ADAMTS5Q9UNA0 930 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 PPP2R3BQ9Y5P8 575 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 ALPK3Q96L96 1907 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 PFASO15067 1338 aa10.03□□□□□ -0.8
DDB1-211ENST00000538280 CEP290O15078 2479 aa10.02□□□□□ -0.8
DDB1-211ENST00000538280 WDR64B1ANS9 1081 aa10.02□□□□□ -0.81
DDB1-211ENST00000538280 CCDC188H7C350 402 aa10.02□□□□□ -0.81
DDB1-211ENST00000538280 VWA5AO00534 786 aa10.02□□□□□ -0.81
DDB1-211ENST00000538280 BACH1O14867 736 aa10.02□□□□□ -0.81
DDB1-211ENST00000538280 ATP9AO75110 1047 aa10.02□□□□□ -0.81
DDB1-211ENST00000538280 RNF40O75150 1001 aa10.02□□□□□ -0.81
DDB1-211ENST00000538280 STBD1O95210 358 aa10.02□□□□□ -0.81
DDB1-211ENST00000538280 KRT13P13646 458 aa10.02□□□□□ -0.81
DDB1-211ENST00000538280 YWHABP31946 246 aaKnown RBP10.02□□□□□ -0.81
DDB1-211ENST00000538280 VAMP7P51809 220 aa10.02□□□□□ -0.81
DDB1-211ENST00000538280 GALCP54803 685 aa10.02□□□□□ -0.81
DDB1-211ENST00000538280 GYS2P54840 703 aa10.02□□□□□ -0.81
DDB1-211ENST00000538280 TNNC1P63316 161 aa10.02□□□□□ -0.81
DDB1-211ENST00000538280 SLC7A5Q01650 507 aa10.02□□□□□ -0.81
DDB1-211ENST00000538280 PPP3CAQ08209 521 aa10.02□□□□□ -0.81
DDB1-211ENST00000538280 VGLL4Q14135 290 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms