RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 DYRK4Q9NR20 520 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 ADAMTS1Q9UHI8 967 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 SNX9Q9Y5X1 595 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 APOEP02649 317 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 HOXA7P31268 230 aaPredicted RBP5.73□□□□□ -1.49
LRP6-203ENST00000538239 BACE1P56817 501 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 RPS6P62753 249 aaKnown RBP5.73□□□□□ -1.49
LRP6-203ENST00000538239 CDC42EP1Q00587 391 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 SH2D4BQ5SQS7 431 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 DAAM1Q9Y4D1 1078 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 IGSF3O75054 1194 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 PPFIA4O75335 1185 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 ATP1A3P13637 1013 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 INPP5BP32019 993 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 MSH2P43246 934 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 SULT1E1P49888 294 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 FAM102AQ5T9C2 384 aaPredicted RBP5.73□□□□□ -1.49
LRP6-203ENST00000538239 KRT39Q6A163 491 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 TXNRD3Q86VQ6 643 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 FAM8A1Q9UBU6 413 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 MAD2L2Q9UI95 211 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 KIAA1210Q9ULL0 1709 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 ZC3H4Q9UPT8 1303 aaKnown RBP5.73□□□□□ -1.49
LRP6-203ENST00000538239 DCDC2CA8MYV0 355 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 PGRMC1O00264 195 aaKnown RBP5.73□□□□□ -1.49
LRP6-203ENST00000538239 CALB1P05937 261 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 SDC4P31431 198 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 ATP1A2P50993 1020 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 GFPT1Q06210 699 aaPredicted RBP5.73□□□□□ -1.49
LRP6-203ENST00000538239 ANO4Q32M45 955 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 GLB1LQ6UWU2 654 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 BZW1Q7L1Q6 419 aaKnown RBP5.73□□□□□ -1.49
LRP6-203ENST00000538239 DEFB128Q7Z7B8 93 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 NUDCD1Q96RS6 583 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 MTA3Q9BTC8 594 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 PHF20Q9BVI0 1012 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 NUP85Q9BW27 656 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 ENTPD7Q9NQZ7 604 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 KCNQ5Q9NR82 932 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 HSPBP1Q9NZL4 362 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 CEP72Q9P209 647 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 TLK1Q9UKI8 766 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 PVALEFA0A1B0GWK0 134 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 MAGEB2O15479 319 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 DGAT1O75907 488 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 RFX5P48382 616 aaPredicted RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 ATP2C1P98194 919 aaPredicted RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 SMAD1Q15797 465 aaKnown RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 MMEL1Q495T6 779 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 ATF7IP2Q5U623 682 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 ALKBH5Q6P6C2 394 aaKnown RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 PROM2Q8N271 834 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 SH3TC2Q8TF17 1288 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 KLK14Q9P0G3 267 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 TJP2Q9UDY2 1190 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 PXDNQ92626 1479 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 LRRC53A6NM62 1247 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 CYBBP04839 570 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 ICAM1P05362 532 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 RGS7P49802 495 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 HDLBPQ00341 1268 aaKnown RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 DRAP1Q14919 205 aaPredicted RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 BBS9Q3SYG4 887 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 SPATA17Q96L03 361 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 EPB41L5Q9HCM4 733 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 SARS2Q9NP81 518 aaKnown RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 STAP1Q9ULZ2 295 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 CEMIPQ8WUJ3 1361 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 FOXN1O15353 648 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 TJP3O95049 919 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 TAL1P17542 331 aaPredicted RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 PPARGP37231 505 aaPredicted RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 RWDD2BP57060 319 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 KRT17Q04695 432 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 SPOPLQ6IQ16 392 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 VSTM4Q8IW00 320 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 TNIP3Q96KP6 325 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 REEP2Q9BRK0 252 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 UNC45AQ9H3U1 944 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 KCNH7Q9NS40 1196 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 TBK1Q9UHD2 729 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 DDTLA6NHG4 134 aaPredicted RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 F8W8V4 182 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 HBP1O60381 514 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 PLS3P13797 630 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 WDR72Q3MJ13 1102 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 NAALADL2Q58DX5 795 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 EFHC2Q5JST6 749 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 FRA10AC1Q70Z53 315 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 GPC2Q8N158 579 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 GINM1Q9NU53 330 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 PYCARDQ9ULZ3 195 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 TRIM17Q9Y577 477 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 ARHGAP42A6NI28 874 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 NVLO15381 856 aaKnown RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 NDUFA10O95299 355 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 ALDH1A1P00352 501 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 VCAM1P19320 739 aa5.72□□□□□ -1.49
LRP6-203ENST00000538239 OAS2P29728 719 aaKnown RBP5.72□□□□□ -1.49
LRP6-203ENST00000538239 RFC5P40937 340 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms