RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 ADAM21Q9UKJ8 722 aa12.38□□□□□ -0.43
SLC28A1-204ENST00000538177 SSC5DA1L4H1 1573 aa12.38□□□□□ -0.43
SLC28A1-204ENST00000538177 CNGA1P29973 690 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 MXI1P50539 228 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 RTP1P59025 263 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 SUPT20HL1Q3ZLR7 823 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 SWSAP1Q6NVH7 229 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 ABHD15Q6UXT9 468 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 CCDC102AQ96A19 550 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 EXOC4Q96A65 974 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 FBXL18Q96ME1 805 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 AGPAT1Q99943 283 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 GOLPH3Q9H4A6 298 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 GDF3Q9NR23 364 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 PSD3Q9NYI0 1048 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 SLC9A2Q9UBY0 812 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 A0A0U1RQG5 324 aaPredicted RBP12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 DENND3A2RUS2 1198 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 LRRN2O75325 713 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 DGAT1O75907 488 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 EPHB4P54760 987 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 ACTR2P61160 394 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 MRPS25P82663 173 aaKnown RBP12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 PPATQ06203 517 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 SNRNP35Q16560 246 aaKnown RBP12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 GNPTABQ3T906 1256 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 EMBQ6PCB8 327 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 PEX26Q7Z412 305 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 NT5DC3Q86UY8 548 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 CBWD2Q8IUF1 395 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 IFT20Q8IY31 132 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 METTL13Q8N6R0 699 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 MCPH1Q8NEM0 835 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 SLC35G2Q8TBE7 412 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 TMC2Q8TDI7 906 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 PARD3BQ8TEW8 1205 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 SCFD2Q8WU76 684 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 HINFPQ9BQA5 517 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 COQ4Q9Y3A0 265 aa12.37□□□□□ -0.43
SLC28A1-204ENST00000538177 PFASO15067 1338 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 ANKRD62A6NC57 917 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 GOLGA8IPA6NC78 632 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 GOLGA8JA6NMD2 632 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 SYF2O95926 243 aaKnown RBP12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 GLI1P08151 1106 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 ENPEPQ07075 957 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 CCDC60Q8IWA6 550 aaPredicted RBP12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 GPC2Q8N158 579 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 RASGEF1CQ8N431 466 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 CTNNBL1Q8WYA6 563 aaPredicted RBP12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 HES6Q96HZ4 224 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 CALR3Q96L12 384 aaKnown RBP12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 MFSD14AQ96MC6 490 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 KIFC3Q9BVG8 833 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 XPNPEP1Q9NQW7 623 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 FAN1Q9Y2M0 1017 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 TELO2Q9Y4R8 837 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 WDR81Q562E7 1941 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 KIAA1217Q5T5P2 1943 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 CEP104O60308 925 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 USP2O75604 605 aaPredicted RBP12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 ICAM3P32942 547 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 GYS2P54840 703 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 TNNC1P63316 161 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 PRKCEQ02156 737 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 NNTQ13423 1086 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 R3HDM1Q15032 1099 aaKnown RBP12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 TCEAL1Q15170 157 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 XKR3Q5GH77 459 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 MIS18BP1Q6P0N0 1132 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 SLC39A4Q6P5W5 647 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 SND1Q7KZF4 910 aaKnown RBP eCLIP12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 DAAM2Q86T65 1068 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 FAM71AQ8IYT1 594 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 CHST13Q8NET6 341 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 DNERQ8NFT8 737 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 CAVIN3Q969G5 261 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 GDAP1L1Q96MZ0 367 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 KRT12Q99456 494 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 OSGEPQ9NPF4 335 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 CYP26B1Q9NR63 512 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 TAS2R14Q9NYV8 317 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 VPS18Q9P253 973 aa12.36□□□□□ -0.43
SLC28A1-204ENST00000538177 TMCO5BA8MYB1 307 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 BUB1BO60566 1050 aaPredicted RBP12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 SUPT20HL2P0C7V6 817 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 GTF2H1P32780 548 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 HADHBP55084 474 aaKnown RBP12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 SOX10P56693 466 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 BRDTQ58F21 947 aaPredicted RBP12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 KRT39Q6A163 491 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 PALB2Q86YC2 1186 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 SLC20A1Q8WUM9 679 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 KCNN1Q92952 543 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 SAAL1Q96ER3 474 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.35□□□□□ -0.432e-6■■■■■ 27.7
SLC28A1-204ENST00000538177 ISCUQ9H1K1 167 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 TMEM8AQ9HCN3 771 aa12.35□□□□□ -0.43
SLC28A1-204ENST00000538177 AMFRQ9UKV5 643 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms