RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 PLS3P13797 630 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 LMNB1P20700 586 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 CCT5P48643 541 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 SNRNP35Q16560 246 aaKnown RBP9.41□□□□□ -0.9
UBE3B-208ENST00000538070 AGBL3Q8NEM8 1001 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 AENQ8WTP8 325 aaKnown RBP9.41□□□□□ -0.9
UBE3B-208ENST00000538070 CNKSR2Q8WXI2 1034 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 RIT2Q99578 217 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 UBXN6Q9BZV1 441 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 ATP8A1Q9Y2Q0 1164 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 SNX24Q9Y343 169 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 WDR64B1ANS9 1081 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 EIF3DO15371 548 aaKnown RBP eCLIP9.41□□□□□ -0.9
UBE3B-208ENST00000538070 CNGA1P29973 690 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 NPTX2P47972 431 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 PLTPP55058 493 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 OSTNP61366 133 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 ERVK-9P63128 1117 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 R3HDM1Q15032 1099 aaKnown RBP9.41□□□□□ -0.9
UBE3B-208ENST00000538070 TRIP13Q15645 432 aaPredicted RBP9.41□□□□□ -0.9
UBE3B-208ENST00000538070 ZNF662Q6ZS27 426 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 CDR2LQ86X02 465 aaPredicted RBP9.41□□□□□ -0.9
UBE3B-208ENST00000538070 TATDN2Q93075 761 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 FIZ1Q96SL8 496 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 AGPAT1Q99943 283 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 ODF2LQ9ULJ1 636 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 PLAAQ9Y263 795 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 PCDHGC5Q9Y5F6 944 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 OPA1O60313 960 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 MMEP08473 750 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 CCDC172P0C7W6 258 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 CTNNA1P35221 906 aaKnown RBP9.41□□□□□ -0.9
UBE3B-208ENST00000538070 KCNJ1P48048 391 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 PSMC5P62195 406 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 CNTN2Q02246 1040 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 ZNF394Q53GI3 561 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 SPOPLQ6IQ16 392 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 ZBTB33Q86T24 672 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 PLEKHO2Q8TD55 490 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 TAS1R2Q8TE23 839 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 BBXQ8WY36 941 aaPredicted RBP9.41□□□□□ -0.9
UBE3B-208ENST00000538070 ZNF653Q96CK0 615 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 PSMD1Q99460 953 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 SLC38A10Q9HBR0 1119 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 PXMP2Q9NR77 195 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 VWA5AO00534 786 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 DHX15O43143 795 aaKnown RBP9.4□□□□□ -0.9
UBE3B-208ENST00000538070 ATP2C2O75185 946 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 FLT3P36888 993 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 POLGP54098 1239 aaPredicted RBP9.4□□□□□ -0.9
UBE3B-208ENST00000538070 GUCY1A3Q02108 690 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 ARHGAP27Q6ZUM4 889 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 INTS8Q75QN2 995 aaKnown RBP9.4□□□□□ -0.9
UBE3B-208ENST00000538070 FAM83AQ86UY5 434 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 NCAPG2Q86XI2 1143 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 BCAS4Q8TDM0 211 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 BSNDQ8WZ55 320 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 KRT35Q92764 455 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 INPP4AQ96PE3 977 aaPredicted RBP9.4□□□□□ -0.9
UBE3B-208ENST00000538070 FNBP1Q96RU3 617 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 TMEM117Q9H0C3 514 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 TMEM206Q9H813 350 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 PPANQ9NQ55 473 aaKnown RBP9.4□□□□□ -0.9
UBE3B-208ENST00000538070 GGA3Q9NZ52 723 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 SEL1LQ9UBV2 794 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 COL11A2P13942 1736 aaPredicted RBP9.4□□□□□ -0.9
UBE3B-208ENST00000538070 LIG4P49917 911 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 DHX9Q08211 1270 aaKnown RBP9.4□□□□□ -0.9
UBE3B-208ENST00000538070 FSTL1Q12841 308 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 ANO5Q75V66 913 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 DPH6Q7L8W6 267 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 SEMA4DQ92854 862 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 ZBTB45Q96K62 511 aaPredicted RBP9.4□□□□□ -0.9
UBE3B-208ENST00000538070 RNPC3Q96LT9 517 aaKnown RBP9.4□□□□□ -0.9
UBE3B-208ENST00000538070 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.4□□□□□ -0.98e-8■■■■■ 37.7
UBE3B-208ENST00000538070 CAPS2Q9BXY5 557 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 TBC1D22BQ9NU19 505 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 PCDHA10Q9Y5I2 948 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 ALG6Q9Y672 507 aa9.4□□□□□ -0.9
UBE3B-208ENST00000538070 PHF20L1A8MW92 1017 aa9.4□□□□□ -0.91
UBE3B-208ENST00000538070 PRLRP16471 622 aa9.4□□□□□ -0.91
UBE3B-208ENST00000538070 CDR1P51861 262 aa9.4□□□□□ -0.91
UBE3B-208ENST00000538070 BMT2Q1RMZ1 405 aa9.4□□□□□ -0.91
UBE3B-208ENST00000538070 GADL1Q6ZQY3 521 aa9.4□□□□□ -0.91
UBE3B-208ENST00000538070 GOLGA5Q8TBA6 731 aa9.4□□□□□ -0.91
UBE3B-208ENST00000538070 CPA5Q8WXQ8 436 aa9.4□□□□□ -0.91
UBE3B-208ENST00000538070 GUCY2CP25092 1073 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 CCND2P30279 289 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 SLCO1A2P46721 670 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 HSD17B4P51659 736 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 LRRC31Q6UY01 552 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 CCDC50Q8IVM0 306 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 SYCE1Q8N0S2 351 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 ZNF280CQ8ND82 737 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 RFFLQ8WZ73 363 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 MAGOHBQ96A72 148 aaKnown RBP9.39□□□□□ -0.91
UBE3B-208ENST00000538070 IFT74Q96LB3 600 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 POLR3FQ9H1D9 316 aaPredicted RBP9.39□□□□□ -0.91
UBE3B-208ENST00000538070 TBX20Q9UMR3 447 aa9.39□□□□□ -0.91
UBE3B-208ENST00000538070 COG5Q9UP83 839 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms