RNA–Protein interactions for RNA: ENST00000537830.6

SLC12A4-203, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,525 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-203ENST00000537830 PALB2Q86YC2 1186 aa12.86□□□□□ -0.35
SLC12A4-203ENST00000537830 RNF10Q8N5U6 811 aaKnown RBP12.86□□□□□ -0.35
SLC12A4-203ENST00000537830 SLC7A3Q8WY07 619 aa12.86□□□□□ -0.35
SLC12A4-203ENST00000537830 RUFY1Q96T51 708 aa12.86□□□□□ -0.35
SLC12A4-203ENST00000537830 SIX2Q9NPC8 291 aa12.86□□□□□ -0.35
SLC12A4-203ENST00000537830 COL2A1P02458 1487 aaPredicted RBP12.86□□□□□ -0.35
SLC12A4-203ENST00000537830 GRID2IPA4D2P6 1211 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 ADRB2P07550 413 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 SSR1P43307 286 aaKnown RBP12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 ZNF211Q13398 564 aaPredicted RBP12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 ZBTB33Q86T24 672 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 CDR2LQ86X02 465 aaPredicted RBP12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 TRIM50Q86XT4 487 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 IWS1Q96ST2 819 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 MKNK1Q9BUB5 465 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 ACBD3Q9H3P7 528 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 EPB41L5Q9HCM4 733 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 ZNF302Q9NR11 478 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 RPTORQ8N122 1335 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 K7ERI5 159 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 RGS20O76081 388 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 FDX1P10109 184 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 MYBL2P10244 700 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 SP2Q02086 613 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 B3GNT9Q6UX72 402 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 METTL13Q8N6R0 699 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 ZNF526Q8TF50 670 aaPredicted RBP12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 DHX38Q92620 1227 aaKnown RBP12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 GPRASP2Q96D09 838 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 PCNTO95613 3336 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 QSER1Q2KHR3 1735 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 MESDQ14696 234 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 LY6KQ17RY6 165 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 C2CD6Q53TS8 623 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 NIPA1Q7RTP0 329 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 RPUSD2Q8IZ73 545 aaKnown RBP12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 CDHR1Q96JP9 859 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 ZBTB45Q96K62 511 aaPredicted RBP12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 R3HDMLQ9H3Y0 253 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 ATP6V0A4Q9HBG4 840 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 CYP26B1Q9NR63 512 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 BTBD7Q9P203 1132 aa12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 DBR1Q9UK59 544 aaKnown RBP12.85□□□□□ -0.35
SLC12A4-203ENST00000537830 GGPS1O95749 300 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 FTLP02792 175 aaPredicted RBP12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 TUBB4BP68371 445 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 FOXR2Q6PJQ5 311 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 MSANTD4Q8NCY6 345 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 SLC30A5Q8TAD4 765 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 FBXO41Q8TF61 875 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 RPGRIP1Q96KN7 1286 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 INPP4AQ96PE3 977 aaPredicted RBP12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 SELENOOQ9BVL4 669 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 TMEM117Q9H0C3 514 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 THAP2Q9H0W7 228 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 AZI2Q9H6S1 392 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 SPON1Q9HCB6 807 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 PNMA2Q9UL42 364 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 GINS2Q9Y248 185 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 LRRIQ3A6PVS8 624 aaPredicted RBP12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 DKC1O60832 514 aaKnown RBP eCLIP12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 HEXIM1O94992 359 aaKnown RBP12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 MUTP22033 750 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 IREB2P48200 963 aaKnown RBP12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 PPP2R5AQ15172 486 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 C9orf131Q5VYM1 1079 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 TMEM161BQ8NDZ6 487 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 SLC35G2Q8TBE7 412 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 TAS1R2Q8TE23 839 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 CEP89Q96ST8 783 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 TARS2Q9BW92 718 aaKnown RBP12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 ANKEF1Q9NU02 776 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 L1RE1Q9UN81 338 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 FAN1Q9Y2M0 1017 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 AFG3L2Q9Y4W6 797 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 KCNA2P16389 499 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 MCM3P25205 808 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 GJC1P36383 396 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 MKRN4PQ13434 485 aaPredicted RBP12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 LRRC71Q8N4P6 559 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 KCTD17Q8N5Z5 321 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 LMBR1Q8WVP7 490 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 AMFRQ9UKV5 643 aa12.84□□□□□ -0.35
SLC12A4-203ENST00000537830 H3BQF6 201 aa12.83□□□□□ -0.36
SLC12A4-203ENST00000537830 RBAK-RBAKDNI3L0D1 243 aa12.83□□□□□ -0.36
SLC12A4-203ENST00000537830 KRIT1O00522 736 aa12.83□□□□□ -0.36
SLC12A4-203ENST00000537830 PJA2O43164 708 aa12.83□□□□□ -0.36
SLC12A4-203ENST00000537830 DGAT1O75907 488 aa12.83□□□□□ -0.36
SLC12A4-203ENST00000537830 SGPL1O95470 568 aa12.83□□□□□ -0.36
SLC12A4-203ENST00000537830 COPB2P35606 906 aa12.83□□□□□ -0.36
SLC12A4-203ENST00000537830 TERF2Q15554 542 aa12.83□□□□□ -0.36
SLC12A4-203ENST00000537830 LNX1Q8TBB1 728 aaPredicted RBP12.83□□□□□ -0.36
SLC12A4-203ENST00000537830 PLEKHO2Q8TD55 490 aa12.83□□□□□ -0.36
SLC12A4-203ENST00000537830 KIFAP3Q92845 792 aa12.83□□□□□ -0.36
SLC12A4-203ENST00000537830 ZBTB10Q96DT7 871 aa12.83□□□□□ -0.36
SLC12A4-203ENST00000537830 DDX47Q9H0S4 455 aaKnown RBP12.83□□□□□ -0.36
SLC12A4-203ENST00000537830 RABEP2Q9H5N1 569 aa12.83□□□□□ -0.36
SLC12A4-203ENST00000537830 NFU1Q9UMS0 254 aa12.83□□□□□ -0.36
SLC12A4-203ENST00000537830 PSEN1P49768 467 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms