RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ARHGEF1Q92888 912 aaKnown RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 ATXN10Q9UBB4 475 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 TRIM10Q9UDY6 481 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 DDX20Q9UHI6 824 aaKnown RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 ATP6V1G2O95670 118 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 CHRNA3P32297 505 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 PPARAQ07869 468 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 RSBN1Q5VWQ0 802 aaPredicted RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 BTN2A1Q7KYR7 527 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 OR2W6PQ8NHA6 318 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 TRIM51Q9BSJ1 452 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 SYBUQ9NX95 663 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 STK17AQ9UEE5 414 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 DSEQ9UL01 958 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 GDAQ9Y2T3 454 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 QRICH2Q9H0J4 1663 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 NAV3Q8IVL0 2385 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 SCN3AQ9NY46 2000 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 ORC4O43929 436 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 SERPINB2P05120 415 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 RUNX1T1Q06455 604 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 IFRD2Q12894 506 aaPredicted RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 DNAL1Q4LDG9 190 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 ATP11CQ8NB49 1132 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 KCNK16Q96T55 309 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 BLOC1S6Q9UL45 172 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 SOS2Q07890 1332 aaPredicted RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 BIVM-ERCC5R4GMW8 1640 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 ATP9AO75110 1047 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 ALKBH5Q6P6C2 394 aaKnown RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 C1orf54Q8WWF1 131 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 NEUROG2Q9H2A3 272 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 OLA1Q9NTK5 396 aaKnown RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 KIAA1024Q9UPX6 916 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 BCL10O95999 233 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 CLPTM1O96005 669 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 KRT16P08779 473 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 ENO3P13929 434 aaPredicted RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 SMARCA1P28370 1054 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 BYSLQ13895 437 aaKnown RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 KRT39Q6A163 491 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 TMED8Q6PL24 325 aaPredicted RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 ANKMY2Q8IV38 441 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 TMEM120BA0PK00 339 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 CFAP99D6REC4 459 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 PODXLO00592 558 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 CASP1P29466 404 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 CLEC4GQ6UXB4 293 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 MICU2Q8IYU8 434 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 RPS6KC1Q96S38 1066 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 HSPBP1Q9NZL4 362 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 LRCH1Q9Y2L9 728 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 PTPRZ1P23471 2315 aaPredicted RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 AKAP10O43572 662 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 PYGLP06737 847 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 SLC9A5Q14940 896 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 SNF8Q96H20 258 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 MMS19Q96T76 1030 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 BRIP1Q9BX63 1249 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 VPS11Q9H270 941 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 DISC1Q9NRI5 854 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 CDV3Q9UKY7 258 aaKnown RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 SPDYE2BA6NHP3 402 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 C16orf96A6NNT2 1141 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 SPDYE6P0CI01 402 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 TFAP4Q01664 338 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 KBTBD12Q3ZCT8 623 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 SH3BP5LQ7L8J4 393 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 SUCLG2Q96I99 432 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 FUT8Q9BYC5 575 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 KLHL31Q9H511 634 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 NSMCE4AQ9NXX6 385 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 SNPHO15079 494 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 S100A9P06702 114 aaKnown RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 MFAP3P55082 362 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 IYDQ6PHW0 289 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 SCUBE1Q8IWY4 988 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 FAF2Q96CS3 445 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 FAM81BQ96LP2 452 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 ZSCAN10Q96SZ4 725 aaPredicted RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 FOXP1Q9H334 677 aaPredicted RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 NDST4Q9H3R1 872 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 M0R2C6 588 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 KRT6AP02538 564 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 KRT6BP04259 564 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 KRT6CP48668 564 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 NUP107P57740 925 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 FAM47AQ5JRC9 791 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 UNC5CLQ8IV45 518 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 FAM129AQ9BZQ8 928 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 WWP1Q9H0M0 922 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 TRPC7Q9HCX4 862 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 KPNA4O00629 521 aaPredicted RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 XPOTO43592 962 aaKnown RBP6□□□□□ -1.45
CSMD1-215ENST00000537824 GSNP06396 782 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 PRR29P0C7W0 189 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 AKR1D1P51857 326 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 KDM7AQ6ZMT4 941 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 PHF21AQ96BD5 680 aa6□□□□□ -1.45
CSMD1-215ENST00000537824 OTULINQ96BN8 352 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms