RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 STRN3Q13033 797 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 AMHR2Q16671 573 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 TPD52L1Q16890 204 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 ZNF410Q86VK4 478 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 CDR2LQ86X02 465 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 FAM126BQ8IXS8 530 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 BICD1Q96G01 975 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 ZBTB45Q96K62 511 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 TSG101Q99816 390 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 HAPLN2Q9GZV7 340 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 C2orf40Q9H1Z8 148 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 FZD8Q9H461 694 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 PCIF1Q9H4Z3 704 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 TMEM206Q9H813 350 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 CDY2AQ9Y6F7 541 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 H0YCG3 227 aa17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 HNRNPDLO14979 420 aaKnown RBP17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 PQBP1O60828 265 aaKnown RBP17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 CHRNA1P02708 482 aa17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 NR3C1P04150 777 aa17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 ZNF18P17022 549 aa17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 CYP2J2P51589 502 aa17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 EFNA5P52803 228 aa17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 MRPS6P82932 125 aaKnown RBP17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 POU5F1BQ06416 359 aa17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 PTK7Q13308 1070 aa17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 MAPK6Q16659 721 aa17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 CDKAL1Q5VV42 579 aa17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 SLC39A5Q6ZMH5 540 aa17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 IFNLR1Q8IU57 520 aaPredicted RBP17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 KCNN1Q92952 543 aa17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 PAWRQ96IZ0 340 aaKnown RBP17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 NFKBIZQ9BYH8 718 aa17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 KCNG1Q9UIX4 513 aa17.16■□□□□ 0.34
SFSWAP-206ENST00000537582 CALUO43852 315 aaPredicted RBP17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 DARSP14868 501 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 NR2F2P24468 414 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 CASP4P49662 377 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 MGAT3Q09327 533 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 SNX17Q15036 470 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 NME8Q8N427 588 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 TMEM106CQ9BVX2 250 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 CELF4Q9BZC1 486 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 EXOC7Q9UPT5 735 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 EN2P19622 333 aaPredicted RBP17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 LIG4P49917 911 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 EDRF1Q3B7T1 1238 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 TRIM60Q495X7 471 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 EEF1DP3Q658K8 133 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 HS2ST1Q7LGA3 356 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 ZC3H3Q8IXZ2 948 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 CPB2Q96IY4 423 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 GCOM2Q9BZD3 368 aaPredicted RBP17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 PCDH10Q9P2E7 1040 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 ANKFY1Q9P2R3 1169 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 TRPV2Q9Y5S1 764 aa17.15■□□□□ 0.34
SFSWAP-206ENST00000537582 MKI67P46013 3256 aaKnown RBP17.14■□□□□ 0.34
SFSWAP-206ENST00000537582 GOLGA8IPA6NC78 632 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 GOLGA8JA6NMD2 632 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 ACKR2O00590 384 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 TSPAN1O60635 241 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 CD4P01730 458 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 PIGRP01833 764 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 CRYBB1P53674 252 aaPredicted RBP17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 FKBP3Q00688 224 aaKnown RBP17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 PLCB2Q00722 1185 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 ADAM9Q13443 819 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 PRPF4BQ13523 1007 aaKnown RBP17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 ZNF618Q5T7W0 954 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 SRGAP1Q7Z6B7 1085 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 RPAINQ86UA6 219 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 CREBRFQ8IUR6 639 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 SAAL1Q96ER3 474 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 ACO2Q99798 780 aaKnown RBP17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 MRPL4Q9BYD3 311 aaKnown RBP17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 C11orf49Q9H6J7 331 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 DMAC2Q9NW81 257 aa17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 NOC2LQ9Y3T9 749 aaKnown RBP17.14■□□□□ 0.33
SFSWAP-206ENST00000537582 KIAA0100Q14667 2235 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 ABLIM1O14639 778 aa17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 AKAP3O75969 853 aa17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 HARSP12081 509 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 CKBP12277 381 aa17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 EIF4BP23588 611 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 ZBTB41Q5SVQ8 909 aa17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 CEP135Q66GS9 1140 aa17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 ARMCX5Q6P1M9 558 aa17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 FOXR2Q6PJQ5 311 aa17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 TRAF7Q6Q0C0 670 aa17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 ZBTB33Q86T24 672 aa17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 RSPH3Q86UC2 560 aa17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 ANKLE1Q8NAG6 615 aa17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 NOC3LQ8WTT2 800 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 CNOT6LQ96LI5 555 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 THAP9Q9H5L6 903 aa17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 PRMT7Q9NVM4 692 aaPredicted RBP17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 HSPBP1Q9NZL4 362 aa17.13■□□□□ 0.33
SFSWAP-206ENST00000537582 UMODL1Q5DID0 1318 aa17.12■□□□□ 0.33
SFSWAP-206ENST00000537582 CNTNAP2Q9UHC6 1331 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms