RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 FAM189BP81408 668 aa7.61□□□□□ -1.19
CCDC7-208ENST00000537047 DSG1Q02413 1049 aa7.61□□□□□ -1.19
CCDC7-208ENST00000537047 MSL3Q8N5Y2 521 aaKnown RBP7.61□□□□□ -1.19
CCDC7-208ENST00000537047 OR5M3Q8NGP4 307 aa7.61□□□□□ -1.19
CCDC7-208ENST00000537047 MRFAP1L1Q96HT8 127 aa7.61□□□□□ -1.19
CCDC7-208ENST00000537047 LSM14BQ9BX40 385 aaKnown RBP7.61□□□□□ -1.19
CCDC7-208ENST00000537047 IFT57Q9NWB7 429 aa7.61□□□□□ -1.19
CCDC7-208ENST00000537047 FZD1Q9UP38 647 aa7.61□□□□□ -1.19
CCDC7-208ENST00000537047 AHRRA9YTQ3 701 aa7.6□□□□□ -1.19
CCDC7-208ENST00000537047 RFPL3O75679 317 aa7.6□□□□□ -1.19
CCDC7-208ENST00000537047 NEK4P51957 841 aa7.6□□□□□ -1.19
CCDC7-208ENST00000537047 MAN2A1Q16706 1144 aa7.6□□□□□ -1.19
CCDC7-208ENST00000537047 DCAF17Q5H9S7 520 aaPredicted RBP7.6□□□□□ -1.19
CCDC7-208ENST00000537047 XYLT1Q86Y38 959 aa7.6□□□□□ -1.19
CCDC7-208ENST00000537047 ORAI3Q9BRQ5 295 aa7.6□□□□□ -1.19
CCDC7-208ENST00000537047 EPC1Q9H2F5 836 aa7.6□□□□□ -1.19
CCDC7-208ENST00000537047 MAGEC2Q9UBF1 373 aaPredicted RBP7.6□□□□□ -1.19
CCDC7-208ENST00000537047 MSRAQ9UJ68 235 aa7.6□□□□□ -1.19
CCDC7-208ENST00000537047 PCDHB6Q9Y5E3 794 aa7.6□□□□□ -1.19
CCDC7-208ENST00000537047 HS3ST4Q9Y661 456 aa7.6□□□□□ -1.19
CCDC7-208ENST00000537047 GRID2IPA4D2P6 1211 aa7.59□□□□□ -1.19
CCDC7-208ENST00000537047 LPXNO60711 386 aa7.59□□□□□ -1.19
CCDC7-208ENST00000537047 ABHD16AO95870 558 aa7.59□□□□□ -1.19
CCDC7-208ENST00000537047 ITGB1P05556 798 aa7.59□□□□□ -1.19
CCDC7-208ENST00000537047 CD40P25942 277 aa7.59□□□□□ -1.19
CCDC7-208ENST00000537047 PCBP1Q15365 356 aaKnown RBP eCLIP7.59□□□□□ -1.19
CCDC7-208ENST00000537047 LRRC55Q6ZSA7 311 aa7.59□□□□□ -1.19
CCDC7-208ENST00000537047 UNC5BQ8IZJ1 945 aa7.59□□□□□ -1.19
CCDC7-208ENST00000537047 SYNE4Q8N205 404 aa7.59□□□□□ -1.19
CCDC7-208ENST00000537047 INTS7Q9NVH2 962 aaKnown RBP7.59□□□□□ -1.19
CCDC7-208ENST00000537047 GAS7O60861 476 aa7.58□□□□□ -1.2
CCDC7-208ENST00000537047 PFKMP08237 780 aa7.58□□□□□ -1.2
CCDC7-208ENST00000537047 APOBEC3AP31941 199 aaPredicted RBP7.58□□□□□ -1.2
CCDC7-208ENST00000537047 ADRA1BP35368 520 aa7.58□□□□□ -1.2
CCDC7-208ENST00000537047 TKFCQ3LXA3 575 aa7.58□□□□□ -1.2
CCDC7-208ENST00000537047 DPY19L2P1Q6NXN4 242 aa7.58□□□□□ -1.2
CCDC7-208ENST00000537047 KCNV1Q6PIU1 500 aa7.58□□□□□ -1.2
CCDC7-208ENST00000537047 ZZZ3Q8IYH5 903 aa7.58□□□□□ -1.2
CCDC7-208ENST00000537047 EFHBQ8N7U6 833 aa7.58□□□□□ -1.2
CCDC7-208ENST00000537047 OR52N2Q8NGI0 321 aa7.58□□□□□ -1.2
CCDC7-208ENST00000537047 PIF1Q9H611 641 aa7.58□□□□□ -1.2
CCDC7-208ENST00000537047 EIF2B4Q9UI10 523 aaKnown RBP7.58□□□□□ -1.2
CCDC7-208ENST00000537047 CENPVL1A0A0U1RR11 272 aa7.57□□□□□ -1.2
CCDC7-208ENST00000537047 PRSS38A1L453 326 aa7.57□□□□□ -1.2
CCDC7-208ENST00000537047 DNAJC6O75061 913 aa7.57□□□□□ -1.2
CCDC7-208ENST00000537047 SEC24DO94855 1032 aaPredicted RBP7.57□□□□□ -1.2
CCDC7-208ENST00000537047 LRRC32Q14392 662 aa7.57□□□□□ -1.2
CCDC7-208ENST00000537047 CSRP2Q16527 193 aa7.57□□□□□ -1.2
CCDC7-208ENST00000537047 CCDC144BQ3MJ40 725 aa7.57□□□□□ -1.2
CCDC7-208ENST00000537047 LY6G5CQ5SRR4 150 aa7.57□□□□□ -1.2
CCDC7-208ENST00000537047 CNNM4Q6P4Q7 775 aa7.57□□□□□ -1.2
CCDC7-208ENST00000537047 CDYL2Q8N8U2 506 aa7.57□□□□□ -1.2
CCDC7-208ENST00000537047 SREK1Q8WXA9 508 aaKnown RBP7.57□□□□□ -1.2
CCDC7-208ENST00000537047 KCNH6Q9H252 994 aa7.57□□□□□ -1.2
CCDC7-208ENST00000537047 PRDM12Q9H4Q4 367 aa7.57□□□□□ -1.2
CCDC7-208ENST00000537047 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.57□□□□□ -1.2
CCDC7-208ENST00000537047 TNFRSF18Q9Y5U5 241 aa7.57□□□□□ -1.2
CCDC7-208ENST00000537047 COL4A3Q01955 1670 aa7.57□□□□□ -1.2
CCDC7-208ENST00000537047 LEFTY2O00292 366 aa7.56□□□□□ -1.2
CCDC7-208ENST00000537047 MAFGO15525 162 aa7.56□□□□□ -1.2
CCDC7-208ENST00000537047 MRPL49Q13405 166 aaKnown RBP7.56□□□□□ -1.2
CCDC7-208ENST00000537047 PTPAQ15257 358 aa7.56□□□□□ -1.2
CCDC7-208ENST00000537047 VPS72Q15906 364 aa7.56□□□□□ -1.2
CCDC7-208ENST00000537047 ESPNLQ6ZVH7 1005 aa7.56□□□□□ -1.2
CCDC7-208ENST00000537047 LRRTM3Q86VH5 581 aa7.56□□□□□ -1.2
CCDC7-208ENST00000537047 LILRA3Q8N6C8 439 aaPredicted RBP7.56□□□□□ -1.2
CCDC7-208ENST00000537047 BEND2Q8NDZ0 799 aa7.56□□□□□ -1.2
CCDC7-208ENST00000537047 GAB3Q8WWW8 586 aa7.56□□□□□ -1.2
CCDC7-208ENST00000537047 FERMT2Q96AC1 680 aa7.56□□□□□ -1.2
CCDC7-208ENST00000537047 IL17RAQ96F46 866 aa7.56□□□□□ -1.2
CCDC7-208ENST00000537047 GPR101Q96P66 508 aaPredicted RBP7.56□□□□□ -1.2
CCDC7-208ENST00000537047 TEX101Q9BY14 249 aa7.56□□□□□ -1.2
CCDC7-208ENST00000537047 SPTLC3Q9NUV7 552 aa7.56□□□□□ -1.2
CCDC7-208ENST00000537047 MGAT5Q09328 741 aa7.55□□□□□ -1.2
CCDC7-208ENST00000537047 SEPT7Q16181 437 aaKnown RBP7.55□□□□□ -1.2
CCDC7-208ENST00000537047 TIGD2Q4W5G0 525 aa7.55□□□□□ -1.2
CCDC7-208ENST00000537047 LYSMD2Q8IV50 215 aa7.55□□□□□ -1.2
CCDC7-208ENST00000537047 RNPC3Q96LT9 517 aaKnown RBP7.55□□□□□ -1.2
CCDC7-208ENST00000537047 FAM193BQ96PV7 902 aaPredicted RBP7.55□□□□□ -1.2
CCDC7-208ENST00000537047 ANKFY1Q9P2R3 1169 aa7.55□□□□□ -1.2
CCDC7-208ENST00000537047 PACSIN3Q9UKS6 424 aa7.55□□□□□ -1.2
CCDC7-208ENST00000537047 TMPRSS11EQ9UL52 423 aa7.55□□□□□ -1.2
CCDC7-208ENST00000537047 A0A1W2PR48 441 aa7.54□□□□□ -1.2
CCDC7-208ENST00000537047 NRP1O14786 923 aa7.54□□□□□ -1.2
CCDC7-208ENST00000537047 TRIM24O15164 1050 aa7.54□□□□□ -1.2
CCDC7-208ENST00000537047 NUDT3O95989 172 aa7.54□□□□□ -1.2
CCDC7-208ENST00000537047 LMNAP02545 664 aaKnown RBP7.54□□□□□ -1.2
CCDC7-208ENST00000537047 PLEKHG4Q58EX7 1191 aa7.54□□□□□ -1.2
CCDC7-208ENST00000537047 TAS1R1Q7RTX1 841 aa7.54□□□□□ -1.2
CCDC7-208ENST00000537047 FAM83AQ86UY5 434 aa7.54□□□□□ -1.2
CCDC7-208ENST00000537047 KIF18BQ86Y91 864 aa7.54□□□□□ -1.2
CCDC7-208ENST00000537047 SYT12Q8IV01 421 aa7.54□□□□□ -1.2
CCDC7-208ENST00000537047 SMC1BQ8NDV3 1235 aa7.54□□□□□ -1.2
CCDC7-208ENST00000537047 NDC1Q9BTX1 674 aa7.54□□□□□ -1.2
CCDC7-208ENST00000537047 ANO3Q9BYT9 981 aa7.54□□□□□ -1.2
CCDC7-208ENST00000537047 TRPM5Q9NZQ8 1165 aa7.54□□□□□ -1.2
CCDC7-208ENST00000537047 PPP2R3BQ9Y5P8 575 aa7.54□□□□□ -1.2
CCDC7-208ENST00000537047 ST20-MTHFSA0A0A6YYL1 179 aa7.53□□□□□ -1.2
CCDC7-208ENST00000537047 RECQL4O94761 1208 aa7.53□□□□□ -1.2
CCDC7-208ENST00000537047 CLEC2LP0C7M8 214 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms