RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 A0A0A6YYK5 440 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 PRAMEF22A3QJZ6 481 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 F8W031 263 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 IPO5O00410 1097 aaKnown RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 OPLAHO14841 1288 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 SUPT3HO75486 399 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 GMNNO75496 209 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 RHOBTB3O94955 611 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 GJB6O95452 261 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 MT-ND3P03897 115 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 MARK3P27448 753 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 PDE1BQ01064 536 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 BFSP1Q12934 665 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 NAB2Q15742 525 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 KBTBD12Q3ZCT8 623 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 ALKBH5Q6P6C2 394 aaKnown RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 ZNF790Q6PG37 636 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 FAM43BQ6ZT52 329 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 LARP4BQ92615 738 aaKnown RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 TLR10Q9BXR5 811 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 UTP6Q9NYH9 597 aaKnown RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 L3MBTL1Q9Y468 752 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 TACC3Q9Y6A5 838 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 CCDC195A0A1B0GUA6 201 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 HARSP12081 509 aaKnown RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 NR2F2P24468 414 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 BTKQ06187 659 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 PABPC4Q13310 644 aaKnown RBP eCLIP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 SPARCL1Q14515 664 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 Q4G0T1 1027 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 FAM228AQ86W67 206 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 PRPF31Q8WWY3 499 aaKnown RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 CASKIN2Q8WXE0 1202 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 DDX17Q92841 729 aaKnown RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 GJA10Q969M2 543 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 CARD9Q9H257 536 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 BLOC1S6Q9UL45 172 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 PITPNM2Q9BZ72 1349 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 TOM1L1O75674 476 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 KITP10721 976 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 PLCG2P16885 1265 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 EEF1DP29692 281 aaKnown RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 USP11P51784 963 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 SLC18A1P54219 525 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 AP2B1P63010 937 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 ATP2C1P98194 919 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 VPS72Q15906 364 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 LONRF1Q17RB8 773 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 GIMAP8Q8ND71 665 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 ASAP3Q8TDY4 903 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 NCSTNQ92542 709 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 TTC17Q96AE7 1141 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 DBR1Q9UK59 544 aaKnown RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 REXO2Q9Y3B8 237 aaKnown RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 CBFA2T3O75081 653 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 ALDH5A1P51649 535 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 MDH1BQ5I0G3 518 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 TSHZ1Q6ZSZ6 1077 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 KIAA0825Q8IV33 1275 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 REXO1Q8N1G1 1221 aaKnown RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 IP6K1Q92551 441 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 ZNF512BQ96KM6 892 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SERPINB12Q96P63 405 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 ZNF317Q96PQ6 595 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 LZTS2Q9BRK4 669 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 HPS5Q9UPZ3 1129 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 PDE2AO00408 941 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 CCDC22O60826 627 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 MYBP10242 640 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 PLCG1P19174 1290 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 NCF2P19878 526 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 CDC27P30260 824 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 GPR162Q16538 588 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 TMC3Q7Z5M5 1100 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 NEK8Q86SG6 692 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 TBC1D10CQ8IV04 446 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 PPWD1Q96BP3 646 aaKnown RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 NDNQ99608 321 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 ATP8A2Q9NTI2 1148 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 ZNF212Q9UDV6 495 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 TNS3Q68CZ2 1445 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 F8VZ95 297 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 F8W8V4 182 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 TTI1O43156 1089 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 CRCPO75575 148 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 INHBAP08476 426 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 STMN1P16949 149 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 PEX5P50542 639 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 ARFIP2P53365 341 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 TFAP4Q01664 338 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SULT2A1Q06520 285 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 INPP4AQ96PE3 977 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 TTYH3Q9C0H2 523 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SAYSD1Q9NPB0 183 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SUCLA2Q9P2R7 463 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SYNGAP1Q96PV0 1343 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 ROBO2Q9HCK4 1378 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 CHRNA3P32297 505 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 SLC44A4Q53GD3 710 aa5.75□□□□□ -1.49
PTPRD-213ENST00000537002 PDXDC1Q6P996 788 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms