RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 FNIP1Q8TF40 1166 aa6.85□□□□□ -1.31
PRKDC-208ENST00000536710 RPS6KC1Q96S38 1066 aa6.85□□□□□ -1.31
PRKDC-208ENST00000536710 OSBPL6Q9BZF3 934 aa6.85□□□□□ -1.31
PRKDC-208ENST00000536710 USP25Q9UHP3 1055 aa6.85□□□□□ -1.31
PRKDC-208ENST00000536710 SCOCQ9UIL1 159 aa6.85□□□□□ -1.31
PRKDC-208ENST00000536710 RPTORQ8N122 1335 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 A0A1W2PR48 441 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 FAM171A2A8MVW0 826 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 H3BML4 177 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 ETV2O00321 342 aaPredicted RBP6.84□□□□□ -1.31
PRKDC-208ENST00000536710 TMEM127O75204 238 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 RPLP2P05387 115 aaKnown RBP6.84□□□□□ -1.31
PRKDC-208ENST00000536710 LTA4HP09960 611 aaKnown RBP6.84□□□□□ -1.31
PRKDC-208ENST00000536710 TAL1P17542 331 aaPredicted RBP6.84□□□□□ -1.31
PRKDC-208ENST00000536710 CTSSP25774 331 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 WASP42768 502 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 PER3P56645 1201 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 MGAT2Q10469 447 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 PICALMQ13492 652 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 EIF4HQ15056 248 aaKnown RBP6.84□□□□□ -1.31
PRKDC-208ENST00000536710 SAFBQ15424 915 aaKnown RBP eCLIP6.84□□□□□ -1.31
PRKDC-208ENST00000536710 IL31Q6EBC2 164 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 PPP4R3AQ6IN85 833 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 NUDT10Q8NFP7 164 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 PJA1Q8NG27 643 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 OR2I1PQ8NGU4 316 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 NUDT11Q96G61 164 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 PWWP2AQ96N64 755 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 KMT5AQ9NQR1 393 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 CHST12Q9NRB3 414 aa6.84□□□□□ -1.31
PRKDC-208ENST00000536710 TPD52L2O43399 206 aaKnown RBP6.83□□□□□ -1.32
PRKDC-208ENST00000536710 UBXN7O94888 489 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 FTLP02792 175 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-208ENST00000536710 CYP1A1P04798 512 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-208ENST00000536710 ALDH2P05091 517 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 IFIT2P09913 472 aaKnown RBP6.83□□□□□ -1.32
PRKDC-208ENST00000536710 GAAP10253 952 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 ZNF28P17035 718 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 PI3P19957 117 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 ECHS1P30084 290 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 ETV4P43268 484 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 NEK3P51956 506 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 USP14P54578 494 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 RRADP55042 308 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 SESN2P58004 480 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-208ENST00000536710 MEF2AQ02078 507 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-208ENST00000536710 ADAM15Q13444 863 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 TOP3AQ13472 1001 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-208ENST00000536710 GALEQ14376 348 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 UBE3CQ15386 1083 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 ABHD15Q6UXT9 468 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 SYDE1Q6ZW31 735 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-208ENST00000536710 OVCH2Q7RTZ1 564 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 SRGAP1Q7Z6B7 1085 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 DRC7Q8IY82 874 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 TMEFF1Q8IYR6 380 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 UNC5BQ8IZJ1 945 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 Q8N3U1 123 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 PPP1R14CQ8TAE6 165 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 NKD2Q969F2 451 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-208ENST00000536710 RAB24Q969Q5 203 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 GFM2Q969S9 779 aaKnown RBP6.83□□□□□ -1.32
PRKDC-208ENST00000536710 UHRF1Q96T88 793 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-208ENST00000536710 CGRRF1Q99675 332 aa6.83□□□□□ -1.32
PRKDC-208ENST00000536710 SPATA6Q9NWH7 488 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-208ENST00000536710 CFAP20Q9Y6A4 193 aaKnown RBP6.83□□□□□ -1.32
PRKDC-208ENST00000536710 A6NNZ2 444 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 FAM227AF5H4B4 570 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 APAF1O14727 1248 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 TPP1O14773 563 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 B3GALT2O43825 422 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 PHF2O75151 1096 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 KLHL18O94889 574 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 RPL13P26373 211 aaKnown RBP6.82□□□□□ -1.32
PRKDC-208ENST00000536710 HTR1BP28222 390 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 SSPNQ14714 243 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 SEPT2Q15019 361 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 PRR31Q5SQ13 230 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 CHST15Q7LFX5 561 aaPredicted RBP6.82□□□□□ -1.32
PRKDC-208ENST00000536710 DAAM2Q86T65 1068 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 TTC7BQ86TV6 843 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 FAM156AQ8NDB6 213 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 PIK3C3Q8NEB9 887 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 SNX33Q8WV41 574 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 GCDHQ92947 438 aaPredicted RBP6.82□□□□□ -1.32
PRKDC-208ENST00000536710 RGMAQ96B86 450 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 TMEM168Q9H0V1 697 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 TLR9Q9NR96 1032 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 TDP1Q9NUW8 608 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 NTMQ9P121 344 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 CNOT6Q9ULM6 557 aaKnown RBP6.82□□□□□ -1.32
PRKDC-208ENST00000536710 VWA7Q9Y334 891 aa6.82□□□□□ -1.32
PRKDC-208ENST00000536710 RBM8AQ9Y5S9 174 aaKnown RBP6.82□□□□□ -1.32
PRKDC-208ENST00000536710 TUSC2O75896 110 aa6.81□□□□□ -1.32
PRKDC-208ENST00000536710 ENDOD1O94919 500 aa6.81□□□□□ -1.32
PRKDC-208ENST00000536710 RHCEP18577 417 aa6.81□□□□□ -1.32
PRKDC-208ENST00000536710 MRE11P49959 708 aa6.81□□□□□ -1.32
PRKDC-208ENST00000536710 RHDQ02161 417 aa6.81□□□□□ -1.32
PRKDC-208ENST00000536710 PCOLCEQ15113 449 aa6.81□□□□□ -1.32
PRKDC-208ENST00000536710 KIAA0753Q2KHM9 967 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms