RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 MOGSQ13724 837 aa7.52□□□□□ -1.21
CLIP1-207ENST00000536634 USP10Q14694 798 aaKnown RBP7.52□□□□□ -1.21
CLIP1-207ENST00000536634 PLEKHH3Q7Z736 793 aa7.52□□□□□ -1.21
CLIP1-207ENST00000536634 RBM15Q96T37 977 aaKnown RBP eCLIP7.52□□□□□ -1.21
CLIP1-207ENST00000536634 PTPN18Q99952 460 aa7.52□□□□□ -1.21
CLIP1-207ENST00000536634 SPO11Q9Y5K1 396 aa7.52□□□□□ -1.21
CLIP1-207ENST00000536634 CRYBG1Q9Y4K1 1723 aa7.52□□□□□ -1.21
CLIP1-207ENST00000536634 SPATA31A5Q5VU36 1347 aa7.52□□□□□ -1.21
CLIP1-207ENST00000536634 SPATA31A7Q8IWB4 1347 aa7.52□□□□□ -1.21
CLIP1-207ENST00000536634 ADGRF5Q8IZF2 1346 aa7.52□□□□□ -1.21
CLIP1-207ENST00000536634 ALS2Q96Q42 1657 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 ARHGEF10O15013 1369 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 LAMTOR5O43504 91 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 CNOT4O95628 575 aaKnown RBP7.51□□□□□ -1.21
CLIP1-207ENST00000536634 CYP17A1P05093 508 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 ITGB3P05106 788 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 CELA3BP08861 270 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 MYCLP1P12525 358 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-207ENST00000536634 SLC6A3Q01959 620 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 PLP2Q04941 152 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 LARP4Q71RC2 724 aaKnown RBP eCLIP7.51□□□□□ -1.21
CLIP1-207ENST00000536634 OTOP2Q7RTS6 562 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 LIMS2Q7Z4I7 341 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 SMC1BQ8NDV3 1235 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 WDR48Q8TAF3 677 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 CALML6Q8TD86 181 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 CARD11Q9BXL7 1154 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 TOMM22Q9NS69 142 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 IFT57Q9NWB7 429 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 PPP4R1LQ9P1A2 415 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 ZNF536O15090 1300 aa7.51□□□□□ -1.21
CLIP1-207ENST00000536634 ABCC11Q96J66 1382 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 NINLQ9Y2I6 1382 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 A0A0G2JNJ9 132 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 B8ZZF3 427 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 HMGCRP04035 888 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 HSD3B2P26439 372 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 APEX1P27695 318 aaKnown RBP7.5□□□□□ -1.21
CLIP1-207ENST00000536634 EPHB4P54760 987 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 PPP2CBP62714 309 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 PPP2CAP67775 309 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 EPHA7Q15375 998 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 TMEM200BQ69YZ2 307 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 ARHGEF18Q6ZSZ5 1173 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 AHI1Q8N157 1196 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 LEO1Q8WVC0 666 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-207ENST00000536634 GPR101Q96P66 508 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-207ENST00000536634 SSBP3Q9BWW4 388 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-207ENST00000536634 KIAA1683Q9H0B3 1180 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 MEGF9Q9H1U4 602 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 ZMAT4Q9H898 229 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 Q9UFV3 132 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 FBXO10Q9UK96 956 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 SLC4A7Q9Y6M7 1214 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 RRBP1Q9P2E9 1410 aaKnown RBP7.5□□□□□ -1.21
CLIP1-207ENST00000536634 NCANO14594 1321 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 RPGRIP1LQ68CZ1 1315 aa7.5□□□□□ -1.21
CLIP1-207ENST00000536634 PARD3Q8TEW0 1356 aa7.49□□□□□ -1.21
CLIP1-207ENST00000536634 UBA6A0AVT1 1052 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-207ENST00000536634 TGM5O43548 720 aa7.49□□□□□ -1.21
CLIP1-207ENST00000536634 NOLC1Q14978 699 aaKnown RBP eCLIP7.49□□□□□ -1.21
CLIP1-207ENST00000536634 EIF4HQ15056 248 aaKnown RBP7.49□□□□□ -1.21
CLIP1-207ENST00000536634 SURF1Q15526 300 aa7.49□□□□□ -1.21
CLIP1-207ENST00000536634 GRAMD4Q6IC98 578 aa7.49□□□□□ -1.21
CLIP1-207ENST00000536634 SLFN12LQ6IEE8 588 aa7.49□□□□□ -1.21
CLIP1-207ENST00000536634 THNSL2Q86YJ6 484 aa7.49□□□□□ -1.21
CLIP1-207ENST00000536634 IFNL2Q8IZJ0 200 aa7.49□□□□□ -1.21
CLIP1-207ENST00000536634 BCL6BQ8N143 479 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-207ENST00000536634 EFHBQ8N7U6 833 aa7.49□□□□□ -1.21
CLIP1-207ENST00000536634 RTF1Q92541 710 aaKnown RBP7.49□□□□□ -1.21
CLIP1-207ENST00000536634 MAML3Q96JK9 1138 aa7.49□□□□□ -1.21
CLIP1-207ENST00000536634 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.49□□□□□ -1.21
CLIP1-207ENST00000536634 MAGEL2Q9UJ55 1249 aa7.49□□□□□ -1.21
CLIP1-207ENST00000536634 YTHDC2Q9H6S0 1430 aaKnown RBP7.49□□□□□ -1.21
CLIP1-207ENST00000536634 NRKQ7Z2Y5 1582 aa7.49□□□□□ -1.21
CLIP1-207ENST00000536634 CASZ1Q86V15 1759 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 MYOM1P52179 1685 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 PRRG2O14669 202 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 PIK3C2GO75747 1445 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 STAT5BP51692 787 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 ROM1Q03395 351 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 MYBPC3Q14896 1274 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 TBR1Q16650 682 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 ZNF827Q17R98 1081 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 TTC38Q5R3I4 469 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 E2F7Q96AV8 911 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 TUBGCP5Q96RT8 1024 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 JADE2Q9NQC1 790 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 SPTLC3Q9NUV7 552 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 PCNTO95613 3336 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 SPATA31A1Q5TZJ5 1347 aa7.48□□□□□ -1.21
CLIP1-207ENST00000536634 K7ESM1 405 aa7.47□□□□□ -1.21
CLIP1-207ENST00000536634 MAFO75444 373 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-207ENST00000536634 BUD31P41223 144 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-207ENST00000536634 ADCYAP1R1P41586 468 aa7.47□□□□□ -1.21
CLIP1-207ENST00000536634 SCNN1BP51168 640 aa7.47□□□□□ -1.21
CLIP1-207ENST00000536634 KPNA1P52294 538 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-207ENST00000536634 SMAD3P84022 425 aaKnown RBP7.47□□□□□ -1.21
CLIP1-207ENST00000536634 RNF151Q2KHN1 245 aa7.47□□□□□ -1.21
CLIP1-207ENST00000536634 PRAMEF9Q5VWM5 478 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms