RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 EYA4O95677 639 aa15.8■□□□□ 0.12
UBE3B-206ENST00000536398 EDN1P05305 212 aa15.8■□□□□ 0.12
UBE3B-206ENST00000536398 SKIP12755 728 aa15.8■□□□□ 0.12
UBE3B-206ENST00000536398 LIG1P18858 919 aa15.8■□□□□ 0.12
UBE3B-206ENST00000536398 RESTQ13127 1097 aa15.8■□□□□ 0.12
UBE3B-206ENST00000536398 SF3A1Q15459 793 aaKnown RBP15.8■□□□□ 0.12
UBE3B-206ENST00000536398 NOMO2Q5JPE7 1267 aa15.8■□□□□ 0.12
UBE3B-206ENST00000536398 CDCA2Q69YH5 1023 aaPredicted RBP15.8■□□□□ 0.12
UBE3B-206ENST00000536398 EP400NLQ6ZTU2 488 aa15.8■□□□□ 0.12
UBE3B-206ENST00000536398 ZNF280BQ86YH2 543 aa15.8■□□□□ 0.12
UBE3B-206ENST00000536398 ADAMTS19Q8TE59 1207 aa15.8■□□□□ 0.12
UBE3B-206ENST00000536398 INTS4Q96HW7 963 aaKnown RBP15.8■□□□□ 0.12
UBE3B-206ENST00000536398 ZNF558Q96NG5 402 aa15.8■□□□□ 0.12
UBE3B-206ENST00000536398 TBC1D13Q9NVG8 400 aa15.8■□□□□ 0.12
UBE3B-206ENST00000536398 IPPQ9Y573 584 aa15.8■□□□□ 0.12
UBE3B-206ENST00000536398 CLIC4Q9Y696 253 aa15.8■□□□□ 0.12
UBE3B-206ENST00000536398 STK24Q9Y6E0 443 aa15.8■□□□□ 0.12
UBE3B-206ENST00000536398 NCLP19338 710 aaKnown RBP15.79■□□□□ 0.12
UBE3B-206ENST00000536398 PDCP20941 246 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 LTBRP36941 435 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 BCAR1P56945 870 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 PLCB3Q01970 1234 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 DLX2Q07687 328 aaPredicted RBP15.79■□□□□ 0.12
UBE3B-206ENST00000536398 COL19A1Q14993 1142 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 ARL6IP4Q66PJ3 421 aaKnown RBP15.79■□□□□ 0.12
UBE3B-206ENST00000536398 GLB1LQ6UWU2 654 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 RBM23Q86U06 439 aaKnown RBP15.79■□□□□ 0.12
UBE3B-206ENST00000536398 TMEM173Q86WV6 379 aaPredicted RBP15.79■□□□□ 0.12
UBE3B-206ENST00000536398 DAW1Q8N136 415 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 MICAL1Q8TDZ2 1067 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 LRRC15Q8TF66 581 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 SNX21Q969T3 373 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 PGBD4Q96DM1 585 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 PABPC5Q96DU9 382 aaKnown RBP15.79■□□□□ 0.12
UBE3B-206ENST00000536398 APOL6Q9BWW8 343 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 CSRNP2Q9H175 543 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 FZD8Q9H461 694 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 NRDE2Q9H7Z3 1164 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 CLDND1Q9NY35 253 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 DNAJB4Q9UDY4 337 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 MTMR6Q9Y217 621 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 BRWD1Q9NSI6 2320 aa15.79■□□□□ 0.12
UBE3B-206ENST00000536398 PLXNA4Q9HCM2 1894 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 A0A1B0GUA9 196 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 PER2O15055 1255 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 ZC3H11AO75152 810 aaKnown RBP eCLIP15.78■□□□□ 0.12
UBE3B-206ENST00000536398 NPTXRO95502 500 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 POMCP01189 267 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 AXLP30530 894 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 PCBP1Q15365 356 aaKnown RBP eCLIP15.78■□□□□ 0.12
UBE3B-206ENST00000536398 AAK1Q2M2I8 961 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 HYIQ5T013 277 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 RINT1Q6NUQ1 792 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 NOTUMQ6P988 496 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 C1orf186Q6ZWK4 172 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 CABP7Q86V35 215 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 SLC39A11Q8N1S5 342 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-206ENST00000536398 BCL7CQ8WUZ0 217 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-206ENST00000536398 MRPS27Q92552 414 aaKnown RBP15.78■□□□□ 0.12
UBE3B-206ENST00000536398 SYMPKQ92797 1274 aaKnown RBP15.78■□□□□ 0.12
UBE3B-206ENST00000536398 MRPL9Q9BYD2 267 aaKnown RBP15.78■□□□□ 0.12
UBE3B-206ENST00000536398 CCDC113Q9H0I3 377 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 GBP3Q9H0R5 595 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 NXF3Q9H4D5 531 aaKnown RBP15.78■□□□□ 0.12
UBE3B-206ENST00000536398 RSAD1Q9HA92 442 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 MIOSQ9NXC5 875 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 SPG21Q9NZD8 308 aa15.78■□□□□ 0.12
UBE3B-206ENST00000536398 TCF20Q9UGU0 1960 aaKnown RBP15.78■□□□□ 0.12
UBE3B-206ENST00000536398 NPHP3-ACAD11A0A0J9YXS1 232 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 SFI1A8K8P3 1242 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 FSCN2O14926 492 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 HIP1RO75146 1068 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 DDHD2O94830 711 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 GALTP07902 379 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 ITGA4P13612 1032 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 AKAP5P24588 427 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 NAMPTP43490 491 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 NRIP1P48552 1158 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 RBM10P98175 930 aaKnown RBP15.77■□□□□ 0.12
UBE3B-206ENST00000536398 UBE3AQ05086 875 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 NCBP1Q09161 790 aaKnown RBP15.77■□□□□ 0.12
UBE3B-206ENST00000536398 RAD51AP2Q09MP3 1159 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 MAPK7Q13164 816 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 PTPAQ15257 358 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 CSPP1Q1MSJ5 1256 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 CTC1Q2NKJ3 1217 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 LEXMQ3ZCV2 418 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 TMEM119Q4V9L6 283 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 PLPP4Q5VZY2 271 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 PPP4R3CPQ6ZMV5 832 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 ZBTB8OSQ8IWT0 167 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 DEPTORQ8TB45 409 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 KIFAP3Q92845 792 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 CCDC51Q96ER9 411 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 GAD1Q99259 594 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 TLR9Q9NR96 1032 aa15.77■□□□□ 0.12
UBE3B-206ENST00000536398 ARL5CA6NH57 179 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 HIDE1A8MVS5 230 aa15.76■□□□□ 0.11
UBE3B-206ENST00000536398 SSBP05455 408 aaKnown RBP eCLIP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms