RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 POTEGQ6S5H5 508 aa15.88■□□□□ 0.13
RTN3P1-201ENST00000536295 AGMOQ6ZNB7 445 aa15.88■□□□□ 0.13
RTN3P1-201ENST00000536295 TMEM173Q86WV6 379 aaPredicted RBP15.88■□□□□ 0.13
RTN3P1-201ENST00000536295 SMRP1Q8NCR6 262 aa15.88■□□□□ 0.13
RTN3P1-201ENST00000536295 ERMNQ8TAM6 284 aa15.88■□□□□ 0.13
RTN3P1-201ENST00000536295 URGCPQ8TCY9 931 aa15.88■□□□□ 0.13
RTN3P1-201ENST00000536295 TMEM169Q96HH4 297 aa15.88■□□□□ 0.13
RTN3P1-201ENST00000536295 NRDE2Q9H7Z3 1164 aa15.88■□□□□ 0.13
RTN3P1-201ENST00000536295 RSAD1Q9HA92 442 aa15.88■□□□□ 0.13
RTN3P1-201ENST00000536295 GPRC5CQ9NQ84 441 aa15.88■□□□□ 0.13
RTN3P1-201ENST00000536295 PI4K2BG5E9Z4 385 aa15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 ST18O60284 1047 aa15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 EYA4O95677 639 aa15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 XRCC6P12956 609 aaKnown RBP eCLIP15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 AFF1P51825 1210 aaKnown RBP15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 MBTD1Q05BQ5 628 aa15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 NCBP1Q09161 790 aaKnown RBP15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 ORC2Q13416 577 aaPredicted RBP15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 SMC1AQ14683 1233 aaKnown RBP15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 TMEM31Q5JXX7 168 aa15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 MRPL10Q7Z7H8 261 aaKnown RBP15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 ZNF280BQ86YH2 543 aa15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 RSPH1Q8WYR4 309 aa15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 POLR3CQ9BUI4 534 aaPredicted RBP15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 APOL5Q9BWW9 433 aa15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 EIF2AQ9BY44 585 aaKnown RBP15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 DNAJB4Q9UDY4 337 aa15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 USP15Q9Y4E8 981 aaPredicted RBP15.87■□□□□ 0.13
RTN3P1-201ENST00000536295 FSD2A1L4K1 749 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 C2orf71A6NGG8 1288 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 LRRIQ4A6NIV6 560 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 C19orf67A6NJJ6 358 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 B4GALT5O43286 388 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 B4GALT3O60512 393 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 POMCP01189 267 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 GALTP07902 379 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 SRGAP2BP0DMP2 458 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 ITGA4P13612 1032 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 NCLP19338 710 aaKnown RBP15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 TRAPPC10P48553 1259 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 SLC11A1P49279 550 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 NOTUMQ6P988 496 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 IFNLR1Q8IU57 520 aaPredicted RBP15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 VPS52Q8N1B4 723 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 SMG8Q8ND04 991 aaKnown RBP15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 BCL7CQ8WUZ0 217 aaPredicted RBP15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 AUTS2Q8WXX7 1259 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 IGSF21Q96ID5 467 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 FAM193BQ96PV7 902 aaPredicted RBP15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 NACC1Q96RE7 527 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 POP1Q99575 1024 aaKnown RBP15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 LRFN3Q9BTN0 628 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 APOL6Q9BWW8 343 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 UPF2Q9HAU5 1272 aaKnown RBP15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 HES2Q9Y543 173 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 IPPQ9Y573 584 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 CNTNAP2Q9UHC6 1331 aa15.86■□□□□ 0.13
RTN3P1-201ENST00000536295 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 ARHGEF35A5YM69 484 aa15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 DDHD2O94830 711 aa15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 CXCL14O95715 111 aa15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 ALADP13716 330 aa15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 ARF4P18085 180 aaPredicted RBP15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 RPA1P27694 616 aa15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 AXLP30530 894 aa15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 POU5F1BQ06416 359 aa15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 BMS1Q14692 1282 aaKnown RBP15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 PCBP1Q15365 356 aaKnown RBP eCLIP15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 AMHR2Q16671 573 aa15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 MCTP1Q6DN14 999 aa15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 CDR2LQ86X02 465 aaPredicted RBP15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 MRPL43Q8N983 215 aaKnown RBP15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 TMEM87AQ8NBN3 555 aa15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 CNNM3Q8NE01 707 aa15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 TRIM6Q9C030 488 aaPredicted RBP15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 CSRNP2Q9H175 543 aa15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 RNF39Q9H2S5 420 aa15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 C11orf16Q9NQ32 467 aa15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 DBR1Q9UK59 544 aaKnown RBP15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 PCDHB6Q9Y5E3 794 aa15.85■□□□□ 0.13
RTN3P1-201ENST00000536295 DCXO43602 365 aa15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 CD2BP2O95400 341 aaKnown RBP15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 CCT6AP40227 531 aaKnown RBP15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 MLH1P40692 756 aa15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 TOB1P50616 345 aaPredicted RBP15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 PTGDRQ13258 359 aa15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 HAUS3Q68CZ6 603 aa15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 ANKRD54Q6NXT1 300 aa15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 PADI6Q6TGC4 694 aa15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 DDX53Q86TM3 631 aaKnown RBP15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 C4orf32Q8N8J7 132 aa15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 MCPH1Q8NEM0 835 aa15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 CCDC51Q96ER9 411 aa15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 ZBP1Q9H171 429 aa15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 KANSL3Q9P2N6 904 aa15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 LRWD1Q9UFC0 647 aa15.84■□□□□ 0.13
RTN3P1-201ENST00000536295 CARNS1A5YM72 827 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 ARL5CA6NH57 179 aa15.83■□□□□ 0.12
RTN3P1-201ENST00000536295 GPR37L1O60883 481 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms