RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 POU2F2P09086 479 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 MARK3P27448 753 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 RDXP35241 583 aaKnown RBP8.64□□□□□ -1.03
CPSF7-214ENST00000535222 IGBP1P78318 339 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 SLFN5Q08AF3 891 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 ZNF423Q2M1K9 1284 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 QRICH1Q2TAL8 776 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 PLK5Q496M5 336 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 HEATR6Q6AI08 1181 aaKnown RBP8.64□□□□□ -1.03
CPSF7-214ENST00000535222 MAP4K3Q8IVH8 894 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 TRMT2AQ8IZ69 625 aaKnown RBP8.64□□□□□ -1.03
CPSF7-214ENST00000535222 ADGRF4Q8IZF3 695 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 RHPN1Q8TCX5 695 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 HELQQ8TDG4 1101 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 FAM3CQ92520 227 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 ZFP91Q96JP5 570 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-214ENST00000535222 KXD1Q9BQD3 176 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 TRAIPQ9BWF2 469 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 PLA2G2FQ9BZM2 168 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 DUSP15Q9H1R2 295 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-214ENST00000535222 SLC32A1Q9H598 525 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 PRORYQ9H606 182 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 C2orf42Q9NWW7 574 aa8.64□□□□□ -1.03
CPSF7-214ENST00000535222 BSNQ9UPA5 3926 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 AHCTF1Q8WYP5 2266 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 C2CD2LO14523 706 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 TGM5O43548 720 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 GAS2O43903 313 aaKnown RBP8.63□□□□□ -1.03
CPSF7-214ENST00000535222 ZC3H11AO75152 810 aaKnown RBP eCLIP8.63□□□□□ -1.03
CPSF7-214ENST00000535222 GPR32O75388 356 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 ZMYND10O75800 440 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 SLC11A1P49279 550 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 SIM1P81133 766 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-214ENST00000535222 SEMA3BQ13214 749 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 PLCB4Q15147 1175 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 APPBP2Q92624 585 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 CRELD1Q96HD1 420 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 MBOAT7Q96N66 472 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 UBA5Q9GZZ9 404 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 ANAPC4Q9UJX5 808 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 KCNH3Q9ULD8 1083 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 DOCK5Q9H7D0 1870 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 NOTCH4Q99466 2003 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 COL4A2P08572 1712 aa8.63□□□□□ -1.03
CPSF7-214ENST00000535222 ATG2BQ96BY7 2078 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 WISP1O95388 367 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 HNRNPA1P09651 372 aaKnown RBP eCLIP8.62□□□□□ -1.03
CPSF7-214ENST00000535222 TRIM27P14373 513 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 KCNA2P16389 499 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 ZSCAN20P17040 1043 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-214ENST00000535222 HOXC13P31276 330 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 WDR44Q5JSH3 913 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 C1orf228Q6PIY5 440 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 POTEHQ6S545 545 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 PLPPR4Q7Z2D5 763 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 GRASPQ7Z6J2 395 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-214ENST00000535222 NPAS3Q8IXF0 933 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 CLASRPQ8N2M8 674 aaKnown RBP8.62□□□□□ -1.03
CPSF7-214ENST00000535222 MDM1Q8TC05 714 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 ELSPBP1Q96BH3 223 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 NACAP1Q9BZK3 213 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 CPVLQ9H3G5 476 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 IL1RAPL2Q9NP60 686 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 CHST7Q9NS84 486 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 TBC1D13Q9NVG8 400 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 GDE1Q9NZC3 331 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 KNTC1P50748 2209 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 WDR81Q562E7 1941 aa8.62□□□□□ -1.03
CPSF7-214ENST00000535222 USP9YO00507 2555 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-214ENST00000535222 SPAARA0A1B0GVQ0 90 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 CAPN9O14815 690 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 ATP9AO75110 1047 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 APPP05067 770 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 KLRC1P26715 233 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 HOXA9P31269 272 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 HOXA13P31271 388 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-214ENST00000535222 DSG1Q02413 1049 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 LRRC32Q14392 662 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 HSP90AB4PQ58FF6 505 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 DGKKQ5KSL6 1271 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 PCSK4Q6UW60 755 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 TAS1R1Q7RTX1 841 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 SYNPOQ8N3V7 929 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 ITFG1Q8TB96 612 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 TRAPPC12Q8WVT3 735 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 ADAMTS14Q8WXS8 1223 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 MTMR8Q96EF0 704 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 MSANTD3Q96H12 275 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 HERC2P3Q9BVR0 1158 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 AMNQ9BXJ7 453 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 JMJD4Q9H9V9 463 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 FNIP2Q9P278 1114 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 DNAJB4Q9UDY4 337 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 EXOC6BQ9Y2D4 811 aa8.61□□□□□ -1.03
CPSF7-214ENST00000535222 GON4LQ3T8J9 2241 aa8.6□□□□□ -1.03
CPSF7-214ENST00000535222 NUP205Q92621 2012 aa8.6□□□□□ -1.03
CPSF7-214ENST00000535222 ARNTLO00327 626 aa8.6□□□□□ -1.03
CPSF7-214ENST00000535222 KHNYNO15037 678 aaKnown RBP8.6□□□□□ -1.03
CPSF7-214ENST00000535222 FOXP2O15409 715 aa8.6□□□□□ -1.03
CPSF7-214ENST00000535222 MEFVO15553 781 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms