RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 DRP2Q13474 957 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 UBXN11Q5T124 520 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 ANKRD54Q6NXT1 300 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 C4orf32Q8N8J7 132 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 IGSF22Q8N9C0 903 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 RNF149Q8NC42 400 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 FAM193BQ96PV7 902 aaPredicted RBP11.53□□□□□ -0.56
CSDE1-217ENST00000534699 TSPAN18Q96SJ8 248 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 ZBP1Q9H171 429 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 PRR33A8MZF0 331 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 H0YCG3 227 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 SEC24BO95487 1268 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 ALDH2P05091 517 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 DNAJB1P25685 340 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 HOXA11P31270 313 aaPredicted RBP11.53□□□□□ -0.56
CSDE1-217ENST00000534699 MBTD1Q05BQ5 628 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 DCAF4L1Q3SXM0 396 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 HERC4Q5GLZ8 1057 aaPredicted RBP11.53□□□□□ -0.56
CSDE1-217ENST00000534699 TMEM31Q5JXX7 168 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 SLC27A1Q6PCB7 646 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 BMP8AQ7Z5Y6 402 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 CMASQ8NFW8 434 aaPredicted RBP11.53□□□□□ -0.56
CSDE1-217ENST00000534699 HELQQ8TDG4 1101 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 IGSF21Q96ID5 467 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 AK8Q96MA6 479 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 PHF7Q9BWX1 381 aaPredicted RBP11.53□□□□□ -0.56
CSDE1-217ENST00000534699 EMILIN2Q9BXX0 1053 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 NT5C3AQ9H0P0 336 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 FZD8Q9H461 694 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.53□□□□□ -0.56
CSDE1-217ENST00000534699 TBC1D13Q9NVG8 400 aa11.53□□□□□ -0.56
CSDE1-217ENST00000534699 RBM19Q9Y4C8 960 aaKnown RBP11.53□□□□□ -0.56
CSDE1-217ENST00000534699 A0A1B0GUA9 196 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 ARHGEF35A5YM69 484 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 LOC730098B7Z3J9 87 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 TSPAN1O60635 241 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 CATSPER3Q86XQ3 398 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 GJA10Q969M2 543 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 IFT74Q96LB3 600 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 PRRX2Q99811 253 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 COLEC11Q9BWP8 271 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 TMEM134Q9H6X4 195 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 NRDE2Q9H7Z3 1164 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 ENTPD7Q9NQZ7 604 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.52□□□□□ -0.57
CSDE1-217ENST00000534699 NR2E1Q9Y466 385 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 GALTP07902 379 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 GLRA2P23416 452 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 PAX3P23760 479 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 MCM7P33993 719 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 GATMP50440 423 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 CAPSQ13938 189 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 MICAL1Q8TDZ2 1067 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 TMEM143Q96AN5 459 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 RIPOR3Q96MK2 946 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 UIMC1Q96RL1 719 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 TCF25Q9BQ70 676 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 POLR3FQ9H1D9 316 aaPredicted RBP11.52□□□□□ -0.57
CSDE1-217ENST00000534699 GJB4Q9NTQ9 266 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 CLEC1BQ9P126 229 aa11.52□□□□□ -0.57
CSDE1-217ENST00000534699 FAM205CA6NFA0 338 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 DCXO43602 365 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 TBX10O75333 385 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 EFEMP2O95967 443 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 SRGAP2CP0DJJ0 459 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 PDCP20941 246 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 NRIP1P48552 1158 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 DSC1Q08554 894 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 GRIK3Q13003 919 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 AMHR2Q16671 573 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 AGMOQ6ZNB7 445 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 BRAPQ7Z569 592 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 TMEM60Q9H2L4 133 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 LRWD1Q9UFC0 647 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 FAN1Q9Y2M0 1017 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 C2orf71A6NGG8 1288 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 POU2F2P09086 479 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 RNASELQ05823 741 aaKnown RBP11.51□□□□□ -0.57
CSDE1-217ENST00000534699 ELAVL2Q12926 359 aaKnown RBP11.51□□□□□ -0.57
CSDE1-217ENST00000534699 KRT79Q5XKE5 535 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 DENND4AQ7Z401 1863 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 RNF168Q8IYW5 571 aaPredicted RBP11.51□□□□□ -0.57
CSDE1-217ENST00000534699 UROC1Q96N76 676 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 ADPGKQ9BRR6 497 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 RXFP1Q9HBX9 757 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 FNIP2Q9P278 1114 aa11.51□□□□□ -0.57
CSDE1-217ENST00000534699 ACKR2O00590 384 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 IL9P15248 144 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 ERVFC1P60507 584 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 CYP4A11Q02928 519 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 MAPK6Q16659 721 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 KYAT1Q16773 422 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 PADI6Q6TGC4 694 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 DTHD1Q6ZMT9 781 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 TMC7Q7Z402 723 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 ZNF579Q8NAF0 562 aaKnown RBP11.5□□□□□ -0.57
CSDE1-217ENST00000534699 SLC22A17Q8WUG5 538 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 DRC1Q96MC2 740 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 TBC1D32Q96NH3 1257 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 PPP1R16BQ96T49 567 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms