RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	ZBTB33	Q86T24	672 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	PPFIBP1	Q86W92	1011 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	EXOC8	Q8IYI6	725 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	DAGLB	Q8NCG7	672 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	ETNPPL	Q8TBG4	499 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	FDXACB1	Q9BRP7	624 aa	Predicted RBP	12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	FAM105A	Q9NUU6	356 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	SUCLA2	Q9P2R7	463 aa	Predicted RBP	12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	PPME1	Q9Y570	386 aa		12.95	□□□□□ -0.34
CTNND1-238	ENST00000534647	KMT2E	Q8IZD2	1858 aa		12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	GALR2	O43603	387 aa	Predicted RBP	12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	CSDE1	O75534	798 aa	Known RBP	12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	OFD1	O75665	1012 aa		12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	MTERF2	Q49AM1	385 aa		12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	TWF2	Q6IBS0	349 aa	Known RBP	12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	ANO5	Q75V66	913 aa		12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	MRPL10	Q7Z7H8	261 aa	Known RBP	12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	TMEM173	Q86WV6	379 aa	Predicted RBP	12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	TRIM22	Q8IYM9	498 aa		12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	BLID	Q8IZY5	108 aa		12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	GJA10	Q969M2	543 aa		12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	PGBD4	Q96DM1	585 aa		12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	NRDE2	Q9H7Z3	1164 aa		12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	IFT122	Q9HBG6	1241 aa		12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	TBC1D13	Q9NVG8	400 aa		12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.94	□□□□□ -0.34
CTNND1-238	ENST00000534647	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	DDX11L8	A8MPP1	907 aa		12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	DKC1	O60832	514 aa	Known RBP eCLIP	12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	ZC3H11A	O75152	810 aa	Known RBP eCLIP	12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	DEXI	O95424	95 aa		12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	TDP2	O95551	362 aa		12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	PDGFB	P01127	241 aa	Predicted RBP	12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	SSRP1	Q08945	709 aa	Known RBP	12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	NPY5R	Q15761	445 aa		12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	RUFY3	Q7L099	469 aa		12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	RHPN2	Q8IUC4	686 aa		12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	ZNF274	Q96GC6	653 aa	Predicted RBP	12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	FAM20A	Q96MK3	541 aa		12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	NCOA5	Q9HCD5	579 aa	Known RBP	12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	ZSWIM6	Q9HCJ5	1215 aa		12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	CYP26B1	Q9NR63	512 aa		12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	KANSL3	Q9P2N6	904 aa		12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	CDH22	Q9UJ99	828 aa		12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	PIN4	Q9Y237	131 aa	Known RBP	12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	12.93	□□□□□ -0.34
CTNND1-238	ENST00000534647	WDR81	Q562E7	1941 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	TMEM150B	A6NC51	233 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	LILRB3	O75022	631 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	REC8	O95072	547 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	EPCAM	P16422	314 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	ABL2	P42684	1182 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	QARS	P47897	775 aa	Known RBP	12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	CLCN5	P51795	746 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	CCT2	P78371	535 aa	Known RBP	12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	PPP2R5C	Q13362	524 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	TOB2	Q14106	344 aa	Predicted RBP	12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	RARS2	Q5T160	578 aa	Known RBP	12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	PPP4R3A	Q6IN85	833 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	AGMO	Q6ZNB7	445 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	CATSPER4	Q7RTX7	472 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	SRGAP1	Q7Z6B7	1085 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	GPR149	Q86SP6	731 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	TDRD5	Q8NAT2	981 aa	Known RBP	12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	TMEM87A	Q8NBN3	555 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	ATOH1	Q92858	354 aa	Predicted RBP	12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	LPP	Q93052	612 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	TMEM175	Q9BSA9	504 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	VN1R3	Q9BXE9	311 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	RHOBTB2	Q9BYZ6	727 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	AGPAT5	Q9NUQ2	364 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	LIMD1	Q9UGP4	676 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	PCDHB2	Q9Y5E7	798 aa		12.92	□□□□□ -0.34
CTNND1-238	ENST00000534647	CNTNAP2	Q9UHC6	1331 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	MEIS3P2	A8K0S8	358 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	INPPL1	O15357	1258 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	ASAP2	O43150	1006 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	GFRA3	O60609	400 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	C1R	P00736	705 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	ALDH2	P05091	517 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	P4HB	P07237	508 aa	Known RBP	12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	SP100	P23497	879 aa	Predicted RBP	12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	HOXA11	P31270	313 aa	Predicted RBP	12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	NBL1	P41271	181 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	SLC11A1	P49279	550 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	CLCN4	P51793	760 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	RNASEL	Q05823	741 aa	Known RBP	12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	NONO	Q15233	471 aa	Known RBP eCLIP	12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	PCBP1	Q15365	356 aa	Known RBP eCLIP	12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	PTPN14	Q15678	1187 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	ASTL	Q6HA08	431 aa	Predicted RBP	12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	C15orf39	Q6ZRI6	1047 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	KRT25	Q7Z3Z0	450 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	CABP7	Q86V35	215 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	ZNF280B	Q86YH2	543 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	KSR1	Q8IVT5	923 aa		12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	C12orf76	Q8N812	135 aa	Predicted RBP	12.91	□□□□□ -0.34
CTNND1-238	ENST00000534647	AUTS2	Q8WXX7	1259 aa		12.91	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms