RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 STARD13Q9Y3M8 1113 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 PPME1Q9Y570 386 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 NRKQ7Z2Y5 1582 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 ROBO3Q96MS0 1386 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 NCANO14594 1321 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 ARHGAP42A6NI28 874 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 CBFA2T3O75081 653 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 PRDM1O75626 825 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 TJP3O95049 919 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 RXRAP19793 462 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 HK2P52789 917 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 ARID5AQ03989 594 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 R3HDM1Q15032 1099 aaKnown RBP4.31□□□□□ -1.72
SOX6-217ENST00000533870 CCNG2Q16589 344 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 RGS9BPQ6ZS82 235 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 SLC9A9Q8IVB4 645 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 NELFCDQ8IXH7 590 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 LRRC34Q8IZ02 419 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 ERP27Q96DN0 273 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 RIT2Q99578 217 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 TRIM15Q9C019 465 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 MLXIPQ9HAP2 919 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 PARVBQ9HBI1 364 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 TUFT1Q9NNX1 390 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 NYAP2Q9P242 653 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 SIK3Q9Y2K2 1263 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 M0R2C6 588 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 DAPK3O43293 454 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 MAGEC1O60732 1142 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 ZPR1O75312 459 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 APOA4P06727 396 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 GTF2H1P32780 548 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 MCAMP43121 646 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 CTCFP49711 727 aaPredicted RBP4.31□□□□□ -1.72
SOX6-217ENST00000533870 MTFR1Q15390 333 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 SLC4A8Q2Y0W8 1093 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 FAM160B2Q86V87 743 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 TDRPQ86YL5 185 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 CRLF3Q8IUI8 442 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 CDAN1Q8IWY9 1227 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 FAM133AQ8N9E0 248 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 TBCKQ8TEA7 893 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 RAPGEF5Q92565 580 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 PPP1R2P1Q96PQ5 205 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 TBC1D22BQ9NU19 505 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 RSL24D1Q9UHA3 163 aaKnown RBP4.31□□□□□ -1.72
SOX6-217ENST00000533870 DDX20Q9UHI6 824 aaKnown RBP4.31□□□□□ -1.72
SOX6-217ENST00000533870 LGALS13Q9UHV8 139 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 NIP7Q9Y221 180 aaKnown RBP eCLIP4.31□□□□□ -1.72
SOX6-217ENST00000533870 TMEM120BA0PK00 339 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 KCNQ3O43525 872 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 YARSP54577 528 aaKnown RBP4.31□□□□□ -1.72
SOX6-217ENST00000533870 GALCP54803 685 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 POLE2P56282 527 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 COASYQ13057 564 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 ITGB3BPQ13352 177 aaPredicted RBP4.31□□□□□ -1.72
SOX6-217ENST00000533870 UGP2Q16851 508 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 FAM91A1Q658Y4 838 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 ZFP1Q6P2D0 407 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 LRRC55Q6ZSA7 311 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 EFL1Q7Z2Z2 1120 aaKnown RBP4.31□□□□□ -1.72
SOX6-217ENST00000533870 C12orf56Q8IXR9 622 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 RBBP8NLQ8NC74 664 aaPredicted RBP4.31□□□□□ -1.72
SOX6-217ENST00000533870 CKAP2Q8WWK9 683 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 LRRC59Q96AG4 307 aaKnown RBP4.31□□□□□ -1.72
SOX6-217ENST00000533870 NSL1Q96IY1 281 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 TEKT3Q9BXF9 490 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 TRABDQ9H4I3 376 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 DCP1AQ9NPI6 582 aaPredicted RBP4.31□□□□□ -1.72
SOX6-217ENST00000533870 CYP26B1Q9NR63 512 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 CYP39A1Q9NYL5 469 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 SCHIP1Q9P0W5 487 aaPredicted RBP4.31□□□□□ -1.72
SOX6-217ENST00000533870 STX18Q9P2W9 335 aaKnown RBP4.31□□□□□ -1.72
SOX6-217ENST00000533870 ALKQ9UM73 1620 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 IGF2BP3O00425 579 aaKnown RBP eCLIP4.31□□□□□ -1.72
SOX6-217ENST00000533870 COPEO14579 308 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 HNRNPRO43390 633 aaKnown RBP4.31□□□□□ -1.72
SOX6-217ENST00000533870 DRD4P21917 467 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 RBM5P52756 815 aaKnown RBP eCLIP4.31□□□□□ -1.72
SOX6-217ENST00000533870 HERVK_113P62684 666 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 PDE1BQ01064 536 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 CTDSPL2Q05D32 466 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 PTP4A2Q12974 167 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 SNX1Q13596 522 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 PDIA6Q15084 440 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 CCDC137Q6PK04 289 aaKnown RBP4.31□□□□□ -1.72
SOX6-217ENST00000533870 MTHFD1LQ6UB35 978 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 TBC1D16Q8TBP0 767 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 SEC14L1Q92503 715 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 CHP1Q99653 195 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 ECT2Q9H8V3 914 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 GINM1Q9NU53 330 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 TRIM33Q9UPN9 1127 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 CNTNAP5Q8WYK1 1306 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 IQCA1LA6NCM1 817 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 RSPH10B2B2RC85 870 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 FSCN2O14926 492 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 TBC1D12O60347 775 aa4.31□□□□□ -1.72
SOX6-217ENST00000533870 CCNT1O60563 726 aaKnown RBP4.31□□□□□ -1.72
SOX6-217ENST00000533870 RTN2O75298 545 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms