RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 PLCB4Q15147 1175 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 PPP2R5AQ15172 486 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 NBPF20Q3BBV1 942 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 FAM102BQ5T8I3 360 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 SFR1Q86XK3 245 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 CSGALNACT2Q8N6G5 542 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 TTC13Q8NBP0 860 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 THAP9Q9H5L6 903 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 MAPK8IP1Q9UQF2 711 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 PHLPP2Q6ZVD8 1323 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 NRCAMQ92823 1304 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 WDR81Q562E7 1941 aa12.03□□□□□ -0.48
CCDC90B-218ENST00000533761 NPHP3-ACAD11A0A0J9YXS1 232 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 RRN3P2A6NIE6 340 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 CALUO43852 315 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 GNA14O95837 355 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 ADH1BP00325 375 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 ATP4AP20648 1035 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 EEF1GP26641 437 aaKnown RBP12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 PTPN11Q06124 597 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 TBC1D8BQ0IIM8 1120 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 NCAPHQ15003 741 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 BMT2Q1RMZ1 405 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 MTERF2Q49AM1 385 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 FAM47CQ5HY64 1035 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 PLA2G4FQ68DD2 849 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 CENPPQ6IPU0 288 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 HS2ST1Q7LGA3 356 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 SESTD1Q86VW0 696 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 TCP11Q8WWU5 503 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 HVCN1Q96D96 273 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 MRFAP1L1Q96HT8 127 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 TMEM206Q9H813 350 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 FANCLQ9NW38 375 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 CGNQ9P2M7 1197 aaKnown RBP12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 SCN10AQ9Y5Y9 1956 aa12.02□□□□□ -0.49
CCDC90B-218ENST00000533761 ARVCFO00192 962 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 ZBTB39O15060 712 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 SMIM10L2AP0DMW4 78 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 SMIM10L2BP0DMW5 78 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 INSRRP14616 1297 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 DNM2P50570 870 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 SOX10P56693 466 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 STX17P56962 302 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 SNRPFP62306 86 aaKnown RBP12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 FKBP3Q00688 224 aaKnown RBP12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 PPFIA1Q13136 1202 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 KNOP1Q1ED39 458 aaKnown RBP12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 EDRF1Q3B7T1 1238 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 ZNF484Q5JVG2 852 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 C1orf53Q5VUE5 145 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 SLC39A5Q6ZMH5 540 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 DRC7Q8IY82 874 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 SLC43A3Q8NBI5 491 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 RETREG2Q8NC44 543 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 DIS3LQ8TF46 1054 aaKnown RBP12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 CDHR5Q9HBB8 845 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 HDAC6Q9UBN7 1215 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 EXOC7Q9UPT5 735 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 DNAH12Q6ZR08 3092 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 GRIN2DO15399 1336 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 MROH7Q68CQ1 1323 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 KAT6AQ92794 2004 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 C17orf102A2RUQ5 167 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 K7ENM7 598 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 PDXKO00764 312 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 PTMAP06454 111 aaKnown RBP12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 ZNF18P17022 549 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 CDC25BP30305 580 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 NPEPPSP55786 919 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 UBASH3AP57075 661 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 EMC2Q15006 297 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 GRIK4Q16099 956 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 TTI2Q6NXR4 508 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 UBE2Q1Q7Z7E8 422 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 SPIRE2Q8WWL2 714 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 PPP1R9BQ96SB3 815 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 ST6GALNAC4Q9H4F1 302 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 TYW1Q9NV66 732 aaKnown RBP12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 SETD4Q9NVD3 440 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 TBC1D7Q9P0N9 293 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 GTF2IRD1Q9UHL9 959 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 PCDHA2Q9Y5H9 948 aa12.01□□□□□ -0.49
CCDC90B-218ENST00000533761 COL1A2P08123 1366 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 RSPH10B2B2RC85 870 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 CETN3O15182 167 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 MAGEB2O15479 319 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 STBD1O95210 358 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 RSPH10BP0C881 870 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 TMOD1P28289 359 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 CDK7P50613 346 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 FANCCQ00597 558 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 MXD4Q14582 209 aaPredicted RBP12□□□□□ -0.49
CCDC90B-218ENST00000533761 CDKAL1Q5VV42 579 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 ZNF720Q7Z2F6 126 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 SYCP3Q8IZU3 236 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 CYP4X1Q8N118 509 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 ZNF507Q8TCN5 953 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 SCFD1Q8WVM8 642 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 LMBR1Q8WVP7 490 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms