RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 UNC45AQ9H3U1 944 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 TPRP12270 2363 aaKnown RBP9.74□□□□□ -0.85
COPB1-210ENST00000533533 C2orf16Q68DN1 1984 aa9.74□□□□□ -0.85
COPB1-210ENST00000533533 DOCK8Q8NF50 2099 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 SPTBN2O15020 2390 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 DENND4AQ7Z401 1863 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 GALR2O43603 387 aaPredicted RBP9.73□□□□□ -0.85
COPB1-210ENST00000533533 NEMFO60524 1076 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 CSDE1O75534 798 aaKnown RBP9.73□□□□□ -0.85
COPB1-210ENST00000533533 CXCL14O95715 111 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 WEE2P0C1S8 567 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 FGFR4P22455 802 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 SFNP31947 248 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 CA8P35219 290 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 MTHFRP42898 656 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 JAK3P52333 1124 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 CUL4AQ13619 759 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 TARBP2Q15633 366 aaKnown RBP9.73□□□□□ -0.85
COPB1-210ENST00000533533 ZNF174Q15697 407 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 CALCRLQ16602 461 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 UGCGQ16739 394 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 NCAPH2Q6IBW4 605 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 PPP4R3AQ6IN85 833 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 NOSTRINQ8IVI9 506 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 VPS52Q8N1B4 723 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 SPRYD3Q8NCJ5 442 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 NLRP7Q8WX94 980 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 RSPH1Q8WYR4 309 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 RIT2Q99578 217 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 TRAIPQ9BWF2 469 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 GCOM2Q9BZD3 368 aaPredicted RBP9.73□□□□□ -0.85
COPB1-210ENST00000533533 ZBP1Q9H171 429 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 CHST12Q9NRB3 414 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 DZANK1Q9NVP4 752 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 IRAK3Q9Y616 596 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 OTOGLQ3ZCN5 2332 aa9.73□□□□□ -0.85
COPB1-210ENST00000533533 CACNA1IQ9P0X4 2223 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.72□□□□□ -0.85
COPB1-210ENST00000533533 CARNS1A5YM72 827 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 PROB1E7EW31 1015 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 ZC3H11AO75152 810 aaKnown RBP eCLIP9.72□□□□□ -0.85
COPB1-210ENST00000533533 ASGR2P07307 311 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 TXKP42681 527 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 PHKA2P46019 1235 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 POLGP54098 1239 aaPredicted RBP9.72□□□□□ -0.85
COPB1-210ENST00000533533 CDC42EP1Q00587 391 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 DRP2Q13474 957 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 GIT2Q14161 759 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 TTC38Q5R3I4 469 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 ATAT1Q5SQI0 421 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 RARS2Q5T160 578 aaKnown RBP9.72□□□□□ -0.85
COPB1-210ENST00000533533 KIAA1841Q6NSI8 718 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 DDX53Q86TM3 631 aaKnown RBP9.72□□□□□ -0.85
COPB1-210ENST00000533533 TMEM173Q86WV6 379 aaPredicted RBP9.72□□□□□ -0.85
COPB1-210ENST00000533533 SLFN12Q8IYM2 578 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 ZDHHC14Q8IZN3 488 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 C12orf76Q8N812 135 aaPredicted RBP9.72□□□□□ -0.85
COPB1-210ENST00000533533 TMEM105Q8N8V8 129 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 TDRD5Q8NAT2 981 aaKnown RBP9.72□□□□□ -0.85
COPB1-210ENST00000533533 TMEM87AQ8NBN3 555 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 ETNPPLQ8TBG4 499 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 AUTS2Q8WXX7 1259 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 SNX21Q969T3 373 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 FAM20AQ96MK3 541 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 MBOAT7Q96N66 472 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 SMOC2Q9H3U7 446 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 LIMD1Q9UGP4 676 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 USTQ9Y2C2 406 aa9.72□□□□□ -0.85
COPB1-210ENST00000533533 IGKV6-21A0A0C4DH24 114 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 WNT7AO00755 349 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 PSMD10O75832 226 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 CTSAP10619 480 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 SKIP12755 728 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 EPCAMP16422 314 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 PDCP20941 246 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 SFPQP23246 707 aaKnown RBP eCLIP9.71□□□□□ -0.86
COPB1-210ENST00000533533 NBL1P41271 181 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 NBR1Q14596 966 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 XKR3Q5GH77 459 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 ASTLQ6HA08 431 aaPredicted RBP9.71□□□□□ -0.86
COPB1-210ENST00000533533 TWF2Q6IBS0 349 aaKnown RBP9.71□□□□□ -0.86
COPB1-210ENST00000533533 KANK3Q6NY19 840 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 GLB1LQ6UWU2 654 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 PLCD3Q8N3E9 789 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 SLC22A17Q8WUG5 538 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 LPPQ93052 612 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 IGSF21Q96ID5 467 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 DCBLD2Q96PD2 775 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 CEP89Q96ST8 783 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 NIFKQ9BYG3 293 aaKnown RBP9.71□□□□□ -0.86
COPB1-210ENST00000533533 NRDE2Q9H7Z3 1164 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 KCNMB3Q9NPA1 279 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 TBC1D13Q9NVG8 400 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 SEPT9Q9UHD8 586 aaPredicted RBP9.71□□□□□ -0.86
COPB1-210ENST00000533533 DBR1Q9UK59 544 aaKnown RBP9.71□□□□□ -0.86
COPB1-210ENST00000533533 PCDHA12Q9UN75 941 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 DOCK6Q96HP0 2047 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 GPR179Q6PRD1 2367 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 NCOR2Q9Y618 2525 aa9.71□□□□□ -0.86
COPB1-210ENST00000533533 MTCL1Q9Y4B5 1905 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms