RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 CTNNB1P35222 781 aa22.59■■□□□ 1.21
CCS-208ENST00000533244 DEPTORQ8TB45 409 aa22.59■■□□□ 1.21
CCS-208ENST00000533244 CPB2Q96IY4 423 aa22.59■■□□□ 1.21
CCS-208ENST00000533244 PLVAPQ9BX97 442 aa22.59■■□□□ 1.21
CCS-208ENST00000533244 CNTNAP2Q9UHC6 1331 aa22.59■■□□□ 1.21
CCS-208ENST00000533244 A0A1B0GUA9 196 aa22.58■■□□□ 1.21
CCS-208ENST00000533244 NPTX2P47972 431 aa22.58■■□□□ 1.21
CCS-208ENST00000533244 EFNA5P52803 228 aa22.58■■□□□ 1.21
CCS-208ENST00000533244 NCBP1Q09161 790 aaKnown RBP22.58■■□□□ 1.21
CCS-208ENST00000533244 RNF169Q8NCN4 708 aa22.58■■□□□ 1.21
CCS-208ENST00000533244 P2RX5Q93086 422 aa22.58■■□□□ 1.21
CCS-208ENST00000533244 KIFC3Q9BVG8 833 aa22.58■■□□□ 1.21
CCS-208ENST00000533244 CWH43Q9H720 699 aa22.58■■□□□ 1.21
CCS-208ENST00000533244 MEIS3P2A8K0S8 358 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 GTPBP6O43824 516 aaPredicted RBP22.57■■□□□ 1.2
CCS-208ENST00000533244 EDN1P05305 212 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 NCLP19338 710 aaKnown RBP22.57■■□□□ 1.2
CCS-208ENST00000533244 PEX3P56589 373 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 MCM6Q14566 821 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 MAPK6Q16659 721 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 LRRC55Q6ZSA7 311 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 ABI1Q8IZP0 508 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 LRRC43Q8N309 656 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 SMG8Q8ND04 991 aaKnown RBP22.57■■□□□ 1.2
CCS-208ENST00000533244 CNNM3Q8NE01 707 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 RASSF8Q8NHQ8 419 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 HELQQ8TDG4 1101 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 LARP4BQ92615 738 aaKnown RBP22.57■■□□□ 1.2
CCS-208ENST00000533244 LPPQ93052 612 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 PGBD4Q96DM1 585 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 NTPCRQ9BSD7 190 aaKnown RBP22.57■■□□□ 1.2
CCS-208ENST00000533244 C11orf84Q9BUA3 381 aaPredicted RBP22.57■■□□□ 1.2
CCS-208ENST00000533244 EIF2AQ9BY44 585 aaKnown RBP22.57■■□□□ 1.2
CCS-208ENST00000533244 TYW1Q9NV66 732 aaKnown RBP22.57■■□□□ 1.2
CCS-208ENST00000533244 ARHGAP28Q9P2N2 729 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 HCSTQ9UBK5 93 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 STK17AQ9UEE5 414 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 CCDC39Q9UFE4 941 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 TTLL13PA6NNM8 815 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 ACKR2O00590 384 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 PRKCBP05771 671 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 DDIT3P35638 169 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 TXLNAP40222 546 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 DMP1Q13316 513 aaPredicted RBP22.57■■□□□ 1.2
CCS-208ENST00000533244 GPM6BQ13491 265 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 NAALADL2Q58DX5 795 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 AGMOQ6ZNB7 445 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 SPIRE2Q8WWL2 714 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 ODF2LQ9ULJ1 636 aa22.57■■□□□ 1.2
CCS-208ENST00000533244 PHLPP2Q6ZVD8 1323 aa22.56■■□□□ 1.2
CCS-208ENST00000533244 NPHP3-ACAD11A0A0J9YXS1 232 aa22.56■■□□□ 1.2
CCS-208ENST00000533244 PLS3P13797 630 aa22.56■■□□□ 1.2
CCS-208ENST00000533244 DNM1Q05193 864 aaKnown RBP22.56■■□□□ 1.2
CCS-208ENST00000533244 RAD51AP2Q09MP3 1159 aa22.56■■□□□ 1.2
CCS-208ENST00000533244 FOXD4L6Q3SYB3 417 aaPredicted RBP22.56■■□□□ 1.2
CCS-208ENST00000533244 SLC27A1Q6PCB7 646 aa22.56■■□□□ 1.2
CCS-208ENST00000533244 FOXD4L3Q6VB84 417 aaPredicted RBP22.56■■□□□ 1.2
CCS-208ENST00000533244 GPBP1Q86WP2 473 aa22.56■■□□□ 1.2
CCS-208ENST00000533244 KCNG4Q8TDN1 519 aa22.56■■□□□ 1.2
CCS-208ENST00000533244 MRPL9Q9BYD2 267 aaKnown RBP22.56■■□□□ 1.2
CCS-208ENST00000533244 TMEM134Q9H6X4 195 aa22.56■■□□□ 1.2
CCS-208ENST00000533244 IPPQ9Y573 584 aa22.56■■□□□ 1.2
CCS-208ENST00000533244 MYH11P35749 1972 aa22.56■■□□□ 1.2
CCS-208ENST00000533244 PRUNE2Q8WUY3 3088 aa22.55■■□□□ 1.2
CCS-208ENST00000533244 A0A087X0B3 334 aa22.55■■□□□ 1.2
CCS-208ENST00000533244 CUTAO60888 179 aa22.55■■□□□ 1.2
CCS-208ENST00000533244 OFD1O75665 1012 aa22.55■■□□□ 1.2
CCS-208ENST00000533244 ZNF131P52739 623 aa22.55■■□□□ 1.2
CCS-208ENST00000533244 PRPF4BQ13523 1007 aaKnown RBP22.55■■□□□ 1.2
CCS-208ENST00000533244 AXDND1Q5T1B0 1012 aaPredicted RBP22.55■■□□□ 1.2
CCS-208ENST00000533244 KCNN1Q92952 543 aa22.55■■□□□ 1.2
CCS-208ENST00000533244 MRPL38Q96DV4 380 aaKnown RBP22.55■■□□□ 1.2
CCS-208ENST00000533244 REEP2Q9BRK0 252 aa22.55■■□□□ 1.2
CCS-208ENST00000533244 PDZD7Q9H5P4 517 aa22.55■■□□□ 1.2
CCS-208ENST00000533244 KMT5AQ9NQR1 393 aa22.55■■□□□ 1.2
CCS-208ENST00000533244 DAXXQ9UER7 740 aaPredicted RBP22.55■■□□□ 1.2
CCS-208ENST00000533244 CFAP45Q9UL16 551 aa22.55■■□□□ 1.2
CCS-208ENST00000533244 RBM19Q9Y4C8 960 aaKnown RBP22.55■■□□□ 1.2
CCS-208ENST00000533244 REV3LO60673 3130 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 CCDC169A6NNP5 214 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 SFI1A8K8P3 1242 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 INPPL1O15357 1258 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 LAG3P18627 525 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 CACNB1Q02641 598 aaPredicted RBP22.54■■□□□ 1.2
CCS-208ENST00000533244 LONRF3Q496Y0 759 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 RRAGBQ5VZM2 374 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 GLB1LQ6UWU2 654 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 TAS1R3Q7RTX0 852 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 CDR2LQ86X02 465 aaPredicted RBP22.54■■□□□ 1.2
CCS-208ENST00000533244 COLGALT1Q8NBJ5 622 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 LMAN2LQ9H0V9 348 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 RSAD1Q9HA92 442 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 AAASQ9NRG9 546 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 KCNG1Q9UIX4 513 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 RCOR1Q9UKL0 485 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 ATG2AQ2TAZ0 1938 aa22.54■■□□□ 1.2
CCS-208ENST00000533244 K7ERI5 159 aa22.53■■□□□ 1.2
CCS-208ENST00000533244 N4BP3O15049 544 aa22.53■■□□□ 1.2
CCS-208ENST00000533244 GRM6O15303 877 aa22.53■■□□□ 1.2
CCS-208ENST00000533244 GIT2Q14161 759 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms