RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 GNAT1P11488 350 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 CYP2C9P11712 490 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 ITGA7Q13683 1181 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 RUFY4Q6ZNE9 571 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 KIAA0319LQ8IZA0 1049 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 ARMC5Q96C12 935 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 NLRP4Q96MN2 994 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 FAM49AQ9H0Q0 323 aaPredicted RBP20.26■□□□□ 0.83
SMPD1-208ENST00000533123 OGDHLQ9ULD0 1010 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 KIAA0100Q14667 2235 aaKnown RBP20.26■□□□□ 0.83
SMPD1-208ENST00000533123 A0A1W2PQ45 241 aaPredicted RBP20.26■□□□□ 0.83
SMPD1-208ENST00000533123 A0A1W2PQY0 241 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 DENND3A2RUS2 1198 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 KBTBD13C9JR72 458 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 EIF3DO15371 548 aaKnown RBP eCLIP20.26■□□□□ 0.83
SMPD1-208ENST00000533123 KIF20AO95235 890 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 GYPCP04921 128 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 GTF2BQ00403 316 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 KNOP1Q1ED39 458 aaKnown RBP20.26■□□□□ 0.83
SMPD1-208ENST00000533123 MIIPQ5JXC2 388 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 GDF6Q6KF10 455 aaPredicted RBP20.26■□□□□ 0.83
SMPD1-208ENST00000533123 STXBP4Q6ZWJ1 553 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 TMEM139Q8IV31 216 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 RNF149Q8NC42 400 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 DEPTORQ8TB45 409 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 ST6GALNAC4Q9H4F1 302 aa20.26■□□□□ 0.83
SMPD1-208ENST00000533123 ITIH6Q6UXX5 1313 aa20.25■□□□□ 0.83
SMPD1-208ENST00000533123 BMT2Q1RMZ1 405 aa20.25■□□□□ 0.83
SMPD1-208ENST00000533123 TMX1Q9H3N1 280 aa20.25■□□□□ 0.83
SMPD1-208ENST00000533123 ARHGAP28Q9P2N2 729 aa20.25■□□□□ 0.83
SMPD1-208ENST00000533123 UQCRHLA0A096LP55 91 aa20.25■□□□□ 0.83
SMPD1-208ENST00000533123 DNM1LO00429 736 aa20.25■□□□□ 0.83
SMPD1-208ENST00000533123 UQCRHP07919 91 aa20.25■□□□□ 0.83
SMPD1-208ENST00000533123 TMEM62Q0P6H9 643 aa20.25■□□□□ 0.83
SMPD1-208ENST00000533123 PPFIBP1Q86W92 1011 aa20.25■□□□□ 0.83
SMPD1-208ENST00000533123 SLC17A8Q8NDX2 589 aa20.25■□□□□ 0.83
SMPD1-208ENST00000533123 MAP7D2Q96T17 732 aa20.25■□□□□ 0.83
SMPD1-208ENST00000533123 NOC4LQ9BVI4 516 aaKnown RBP20.25■□□□□ 0.83
SMPD1-208ENST00000533123 STARD7Q9NQZ5 370 aa20.25■□□□□ 0.83
SMPD1-208ENST00000533123 KCNG1Q9UIX4 513 aa20.25■□□□□ 0.83
SMPD1-208ENST00000533123 AKR1B15C9JRZ8 316 aaPredicted RBP20.24■□□□□ 0.83
SMPD1-208ENST00000533123 CASP14P31944 242 aa20.24■□□□□ 0.83
SMPD1-208ENST00000533123 FXR1P51114 621 aaKnown RBP eCLIP20.24■□□□□ 0.83
SMPD1-208ENST00000533123 FKBP3Q00688 224 aaKnown RBP20.24■□□□□ 0.83
SMPD1-208ENST00000533123 FOXR2Q6PJQ5 311 aa20.24■□□□□ 0.83
SMPD1-208ENST00000533123 U2AF1L4Q8WU68 220 aaKnown RBP20.24■□□□□ 0.83
SMPD1-208ENST00000533123 DNAJB3Q8WWF6 145 aa20.24■□□□□ 0.83
SMPD1-208ENST00000533123 TBX20Q9UMR3 447 aa20.24■□□□□ 0.83
SMPD1-208ENST00000533123 PHF24Q9UPV7 400 aa20.24■□□□□ 0.83
SMPD1-208ENST00000533123 SMIM35A0A1B0GVV1 85 aa20.23■□□□□ 0.83
SMPD1-208ENST00000533123 RNF225M0QZC1 329 aaPredicted RBP20.23■□□□□ 0.83
SMPD1-208ENST00000533123 ASAP2O43150 1006 aa20.23■□□□□ 0.83
SMPD1-208ENST00000533123 SESTD1Q86VW0 696 aa20.23■□□□□ 0.83
SMPD1-208ENST00000533123 ZMYM2Q9UBW7 1377 aa20.23■□□□□ 0.83
SMPD1-208ENST00000533123 SGPL1O95470 568 aa20.23■□□□□ 0.83
SMPD1-208ENST00000533123 FGFR1OPO95684 399 aaKnown RBP20.23■□□□□ 0.83
SMPD1-208ENST00000533123 TFRCP02786 760 aaKnown RBP20.23■□□□□ 0.83
SMPD1-208ENST00000533123 ALCAMQ13740 583 aa20.23■□□□□ 0.83
SMPD1-208ENST00000533123 E4F1Q66K89 784 aaPredicted RBP20.23■□□□□ 0.83
SMPD1-208ENST00000533123 TAS1R3Q7RTX0 852 aa20.23■□□□□ 0.83
SMPD1-208ENST00000533123 SYCP3Q8IZU3 236 aa20.23■□□□□ 0.83
SMPD1-208ENST00000533123 CCDC112Q8NEF3 446 aa20.23■□□□□ 0.83
SMPD1-208ENST00000533123 TRMT1Q9NXH9 659 aaKnown RBP20.23■□□□□ 0.83
SMPD1-208ENST00000533123 A0A087WZ62 844 aa20.22■□□□□ 0.83
SMPD1-208ENST00000533123 K7ERI5 159 aa20.22■□□□□ 0.83
SMPD1-208ENST00000533123 MFAP3LO75121 409 aa20.22■□□□□ 0.83
SMPD1-208ENST00000533123 NLRP11P59045 1033 aaKnown RBP20.22■□□□□ 0.83
SMPD1-208ENST00000533123 TFDP1Q14186 410 aa20.22■□□□□ 0.83
SMPD1-208ENST00000533123 ACCSQ96QU6 501 aa20.22■□□□□ 0.83
SMPD1-208ENST00000533123 BAG1Q99933 345 aaPredicted RBP20.22■□□□□ 0.83
SMPD1-208ENST00000533123 FDXACB1Q9BRP7 624 aaPredicted RBP20.22■□□□□ 0.83
SMPD1-208ENST00000533123 USP20Q9Y2K6 914 aa20.22■□□□□ 0.83
SMPD1-208ENST00000533123 UBE4BO95155 1302 aa20.22■□□□□ 0.83
SMPD1-208ENST00000533123 TGFB1I1O43294 461 aa20.22■□□□□ 0.83
SMPD1-208ENST00000533123 NRDCO43847 1150 aa20.22■□□□□ 0.83
SMPD1-208ENST00000533123 KLK7P49862 253 aa20.22■□□□□ 0.83
SMPD1-208ENST00000533123 CRISPLD2Q9H0B8 497 aa20.22■□□□□ 0.83
SMPD1-208ENST00000533123 IFT122Q9HBG6 1241 aa20.22■□□□□ 0.83
SMPD1-208ENST00000533123 PRDM10Q9NQV6 1147 aa20.22■□□□□ 0.83
SMPD1-208ENST00000533123 TRMT13Q9NUP7 481 aaKnown RBP20.22■□□□□ 0.83
SMPD1-208ENST00000533123 GINS2Q9Y248 185 aa20.22■□□□□ 0.83
SMPD1-208ENST00000533123 H0YCG3 227 aa20.21■□□□□ 0.83
SMPD1-208ENST00000533123 GPC3P51654 580 aa20.21■□□□□ 0.83
SMPD1-208ENST00000533123 PTGISQ16647 500 aa20.21■□□□□ 0.83
SMPD1-208ENST00000533123 KIZQ2M2Z5 673 aa20.21■□□□□ 0.83
SMPD1-208ENST00000533123 CCAR2Q8N163 923 aaKnown RBP20.21■□□□□ 0.83
SMPD1-208ENST00000533123 NLRP7Q8WX94 980 aa20.21■□□□□ 0.83
SMPD1-208ENST00000533123 GBP3Q9H0R5 595 aa20.21■□□□□ 0.83
SMPD1-208ENST00000533123 TMEM206Q9H813 350 aa20.21■□□□□ 0.83
SMPD1-208ENST00000533123 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.21■□□□□ 0.83
SMPD1-208ENST00000533123 TISP43B9A030 160 aa20.21■□□□□ 0.83
SMPD1-208ENST00000533123 PDXKO00764 312 aa20.21■□□□□ 0.83
SMPD1-208ENST00000533123 CSDE1O75534 798 aaKnown RBP20.21■□□□□ 0.83
SMPD1-208ENST00000533123 VWA3BQ502W6 1294 aa20.21■□□□□ 0.83
SMPD1-208ENST00000533123 DNTTIP2Q5QJE6 756 aaKnown RBP20.21■□□□□ 0.83
SMPD1-208ENST00000533123 CDCA2Q69YH5 1023 aaPredicted RBP20.21■□□□□ 0.83
SMPD1-208ENST00000533123 MAP4K3Q8IVH8 894 aa20.21■□□□□ 0.83
SMPD1-208ENST00000533123 SCLT1Q96NL6 688 aa20.21■□□□□ 0.83
SMPD1-208ENST00000533123 MINDY3Q9H8M7 445 aa20.21■□□□□ 0.83
SMPD1-208ENST00000533123 TYW1Q9NV66 732 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms