RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	LINC00271	P0C7V0	271 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	CD52	P31358	61 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	SFN	P31947	248 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	GATM	P50440	423 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	TOB1	P50616	345 aa	Predicted RBP	9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	ORC2	Q13416	577 aa	Predicted RBP	9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	CLUL1	Q15846	466 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	FBXO47	Q5MNV8	452 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	MARCH8	Q5T0T0	291 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	ZNF787	Q6DD87	383 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	BRAP	Q7Z569	592 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	CCDC60	Q8IWA6	550 aa	Predicted RBP	9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	TMEM192	Q8IY95	271 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	SMAP1	Q8IYB5	467 aa	Predicted RBP	9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	SLFN12	Q8IYM2	578 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	MRPL38	Q96DV4	380 aa	Known RBP	9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	CALR3	Q96L12	384 aa	Known RBP	9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	FAM20A	Q96MK3	541 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	PPP1R16B	Q96T49	567 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	LRFN3	Q9BTN0	628 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	TMEM60	Q9H2L4	133 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	AZI2	Q9H6S1	392 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	AGO3	Q9H9G7	860 aa	Known RBP	9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	ZNF302	Q9NR11	478 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	LMCD1	Q9NZU5	365 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	VAV3	Q9UKW4	847 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	PCDHB6	Q9Y5E3	794 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	PLXNA4	Q9HCM2	1894 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	ADGRA3	Q8IWK6	1321 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	NRCAM	Q92823	1304 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	IGSF9B	Q9UPX0	1349 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	TTC3	P53804	2025 aa		9.02	□□□□□ -0.97
PUM1-223	ENST00000532678	IGKV6D-21	A0A0A0MT36	114 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	9.01	□□□□□ -0.97
PUM1-223	ENST00000532678		H3BNC9	293 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	GRM6	O15303	877 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	ATG7	O95352	703 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	BMP2	P12643	396 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	SKI	P12755	728 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	INSRR	P14616	1297 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	GTF2F1	P35269	517 aa	Known RBP eCLIP	9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	STAT5B	P51692	787 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	MRPS6	P82932	125 aa	Known RBP	9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	PPP2R5C	Q13362	524 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	PKP1	Q13835	747 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	PLCB4	Q15147	1175 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	UGCG	Q16739	394 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	LEXM	Q3ZCV2	418 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	PAN2	Q504Q3	1202 aa	Known RBP	9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	TIGD5	Q53EQ6	642 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	FOXD4L5	Q5VV16	416 aa	Predicted RBP	9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	FAM160B1	Q5W0V3	765 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	NCAPH2	Q6IBW4	605 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	ABHD15	Q6UXT9	468 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	MIER3	Q7Z3K6	550 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	RPAIN	Q86UA6	219 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	APBB2	Q92870	758 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	MTMR9	Q96QG7	549 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	SMARCAD1	Q9H4L7	1026 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	RC3H2	Q9HBD1	1191 aa	Known RBP	9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	DISC1	Q9NRI5	854 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	ERAP1	Q9NZ08	941 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	GABBR1	Q9UBS5	961 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	PCDHA10	Q9Y5I2	948 aa		9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	MYH9	P35579	1960 aa	Known RBP	9.01	□□□□□ -0.97
PUM1-223	ENST00000532678	EVPL	Q92817	2033 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	MBLAC1	A4D2B0	266 aa	Predicted RBP	9	□□□□□ -0.97
PUM1-223	ENST00000532678	EML1	O00423	815 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	GPC1	P35052	558 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	ANP32A	P39687	249 aa	Known RBP	9	□□□□□ -0.97
PUM1-223	ENST00000532678	TXK	P42681	527 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	SPIRE1	Q08AE8	756 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	PTPRO	Q16827	1216 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	TMEM266	Q2M3C6	531 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	EML3	Q32P44	896 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	SWSAP1	Q6NVH7	229 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	TAF2	Q6P1X5	1199 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	FAM173B	Q6P4H8	233 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	B3GNT9	Q6UX72	402 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	TSHZ1	Q6ZSZ6	1077 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	PLPPR4	Q7Z2D5	763 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	FAM178B	Q8IXR5	827 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	CKAP2L	Q8IYA6	745 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	FIBCD1	Q8N539	461 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	RDM1	Q8NG50	284 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	SAMD11	Q96NU1	681 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	C1QTNF1	Q9BXJ1	281 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	NSUN3	Q9H649	340 aa	Known RBP	9	□□□□□ -0.97
PUM1-223	ENST00000532678	TTC12	Q9H892	705 aa	Predicted RBP	9	□□□□□ -0.97
PUM1-223	ENST00000532678	CLDND1	Q9NY35	253 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	PCDHGC5	Q9Y5F6	944 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	TRPV2	Q9Y5S1	764 aa		9	□□□□□ -0.97
PUM1-223	ENST00000532678	MRPL42	Q9Y6G3	142 aa	Known RBP	9	□□□□□ -0.97
PUM1-223	ENST00000532678	ARID2	Q68CP9	1835 aa		8.99	□□□□□ -0.97
PUM1-223	ENST00000532678	ENPP3	O14638	875 aa		8.99	□□□□□ -0.97
PUM1-223	ENST00000532678	LINC01565	O15544	149 aa		8.99	□□□□□ -0.97
PUM1-223	ENST00000532678	F13A1	P00488	732 aa		8.99	□□□□□ -0.97
PUM1-223	ENST00000532678	ZSCAN22	P10073	491 aa	Predicted RBP	8.99	□□□□□ -0.97
PUM1-223	ENST00000532678	PLA2G5	P39877	138 aa		8.99	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms