RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 EHBP1L1Q8N3D4 1523 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 POTECB2RU33 542 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 AP3B1O00203 1094 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 HNRNPDLO14979 420 aaKnown RBP8.59□□□□□ -1.04
CTNND1-231ENST00000532463 MED26O95402 600 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 POLGP54098 1239 aaPredicted RBP8.59□□□□□ -1.04
CTNND1-231ENST00000532463 NRG3P56975 720 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 NLRP11P59045 1033 aaKnown RBP8.59□□□□□ -1.04
CTNND1-231ENST00000532463 ZBED6P86452 979 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 TFCP2Q12800 502 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 EFR3AQ14156 821 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 THEMIS2Q5TEJ8 643 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 C1orf228Q6PIY5 440 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 TCAIMQ8N3R3 496 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 FAM133AQ8N9E0 248 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 LINS1Q8NG48 757 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 EXD1Q8NHP7 514 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 L3MBTL3Q96JM7 780 aaPredicted RBP8.59□□□□□ -1.04
CTNND1-231ENST00000532463 USP28Q96RU2 1077 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 RANBP17Q9H2T7 1088 aaKnown RBP8.59□□□□□ -1.04
CTNND1-231ENST00000532463 GALNT8Q9NY28 637 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 CHPF2Q9P2E5 772 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 KLHL3Q9UH77 587 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 NRBP1Q9UHY1 535 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 SNX24Q9Y343 169 aa8.59□□□□□ -1.04
CTNND1-231ENST00000532463 CCDC162PA2VCL2 907 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 PSMC3P17980 439 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 NR2F2P24468 414 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 ANXA13P27216 316 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 HMOX2P30519 316 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 TECP42680 631 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 NCALDP61601 193 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 PDZK1Q5T2W1 519 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 RNF219Q5W0B1 726 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-231ENST00000532463 GALNT17Q6IS24 598 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 ESRP1Q6NXG1 681 aaKnown RBP8.58□□□□□ -1.04
CTNND1-231ENST00000532463 COPS6Q7L5N1 327 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 ZBED8Q8IZ13 594 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 TSPYL6Q8N831 410 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 SCFD1Q8WVM8 642 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 APPBP2Q92624 585 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 TMA16Q96EY4 203 aaKnown RBP8.58□□□□□ -1.04
CTNND1-231ENST00000532463 SNF8Q96H20 258 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 KRT84Q9NSB2 600 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 VAV3Q9UKW4 847 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 PCDHA13Q9Y5I0 950 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 IKBKBO14920 756 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 BNIP3LO60238 219 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 KLHL2O95198 593 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 ENO3P13929 434 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-231ENST00000532463 GAP43P17677 238 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 MARK3P27448 753 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 ALDH18A1P54886 795 aaKnown RBP8.58□□□□□ -1.04
CTNND1-231ENST00000532463 SNX30Q5VWJ9 437 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 TPTE2Q6XPS3 522 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 ZNF786Q8N393 782 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 WDR36Q8NI36 951 aaKnown RBP8.58□□□□□ -1.04
CTNND1-231ENST00000532463 NIP7Q9Y221 180 aaKnown RBP eCLIP8.58□□□□□ -1.04
CTNND1-231ENST00000532463 PCDHA5Q9Y5H7 936 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 SOS1Q07889 1333 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-231ENST00000532463 PGM3O95394 542 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 SLC16A1P53985 500 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 MCCD1P59942 119 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-231ENST00000532463 HPCAP84074 193 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 KRT24Q2M2I5 525 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 RUNDC3AQ59EK9 446 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 SETD3Q86TU7 594 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-231ENST00000532463 ZCCHC7Q8N3Z6 543 aaKnown RBP8.58□□□□□ -1.04
CTNND1-231ENST00000532463 CHURC1Q8WUH1 139 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 GCNAQ96QF7 691 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 RBBP8Q99708 897 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 APOL4Q9BPW4 351 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 SARS2Q9NP81 518 aaKnown RBP8.58□□□□□ -1.04
CTNND1-231ENST00000532463 VPS54Q9P1Q0 977 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 ADGRF5Q8IZF2 1346 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 PNMA8CA0A1B0GUJ8 204 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 FAM200BP0CF97 657 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 TYK2P29597 1187 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 CSE1LP55060 971 aaKnown RBP8.58□□□□□ -1.04
CTNND1-231ENST00000532463 ZNF827Q17R98 1081 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 ODR4Q5SWX8 454 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 FAM160B1Q5W0V3 765 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 ARHGAP22Q7Z5H3 698 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 MFN1Q8IWA4 741 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 BLIDQ8IZY5 108 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 DPP10Q8N608 796 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 SUGCTQ9HAC7 445 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 KRCC1Q9NPI7 259 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-231ENST00000532463 SLC52A1Q9NWF4 448 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 PPP2R3BQ9Y5P8 575 aa8.58□□□□□ -1.04
CTNND1-231ENST00000532463 TESPA1A2RU30 521 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-231ENST00000532463 P4HA2O15460 535 aa8.57□□□□□ -1.04
CTNND1-231ENST00000532463 ARF5P84085 180 aa8.57□□□□□ -1.04
CTNND1-231ENST00000532463 TNFAIP2Q03169 654 aa8.57□□□□□ -1.04
CTNND1-231ENST00000532463 EPS8Q12929 822 aa8.57□□□□□ -1.04
CTNND1-231ENST00000532463 LLGL1Q15334 1064 aa8.57□□□□□ -1.04
CTNND1-231ENST00000532463 EIF2S3LQ2VIR3 472 aaKnown RBP8.57□□□□□ -1.04
CTNND1-231ENST00000532463 CCDC157Q569K6 752 aa8.57□□□□□ -1.04
CTNND1-231ENST00000532463 ZBTB40Q9NUA8 1239 aa8.57□□□□□ -1.04
CTNND1-231ENST00000532463 WBP11Q9Y2W2 641 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms