RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 SCP2P22307 547 aa24.53■■□□□ 1.52
LRRK1-208ENST00000532029 CASP1P29466 404 aa24.53■■□□□ 1.52
LRRK1-208ENST00000532029 STRN3Q13033 797 aa24.53■■□□□ 1.52
LRRK1-208ENST00000532029 PRPF4BQ13523 1007 aaKnown RBP24.53■■□□□ 1.52
LRRK1-208ENST00000532029 AMHR2Q16671 573 aa24.53■■□□□ 1.52
LRRK1-208ENST00000532029 FAM187BQ17R55 369 aa24.53■■□□□ 1.52
LRRK1-208ENST00000532029 TWF2Q6IBS0 349 aaKnown RBP24.53■■□□□ 1.52
LRRK1-208ENST00000532029 UNC13DQ70J99 1090 aa24.53■■□□□ 1.52
LRRK1-208ENST00000532029 HAUS6Q7Z4H7 955 aa24.53■■□□□ 1.52
LRRK1-208ENST00000532029 RTN4RL1Q86UN2 441 aaPredicted RBP24.53■■□□□ 1.52
LRRK1-208ENST00000532029 MYOCDQ8IZQ8 938 aa24.53■■□□□ 1.52
LRRK1-208ENST00000532029 TMEM161BQ8NDZ6 487 aa24.53■■□□□ 1.52
LRRK1-208ENST00000532029 LINC01599Q8WXQ3 324 aa24.53■■□□□ 1.52
LRRK1-208ENST00000532029 TIGD1Q96MW7 591 aa24.53■■□□□ 1.52
LRRK1-208ENST00000532029 SLC9A7Q96T83 725 aa24.53■■□□□ 1.52
LRRK1-208ENST00000532029 MYH11P35749 1972 aa24.53■■□□□ 1.52
LRRK1-208ENST00000532029 ACKR2O00590 384 aa24.52■■□□□ 1.52
LRRK1-208ENST00000532029 NR1I2O75469 434 aa24.52■■□□□ 1.52
LRRK1-208ENST00000532029 MAPTP10636 758 aaKnown RBP24.52■■□□□ 1.52
LRRK1-208ENST00000532029 ABCD1P33897 745 aa24.52■■□□□ 1.52
LRRK1-208ENST00000532029 COASYQ13057 564 aa24.52■■□□□ 1.52
LRRK1-208ENST00000532029 NOTUMQ6P988 496 aa24.52■■□□□ 1.52
LRRK1-208ENST00000532029 SLC24A5Q71RS6 500 aa24.52■■□□□ 1.52
LRRK1-208ENST00000532029 PHOSPHO2Q8TCD6 241 aa24.52■■□□□ 1.52
LRRK1-208ENST00000532029 CPB2Q96IY4 423 aa24.52■■□□□ 1.52
LRRK1-208ENST00000532029 MRPL44Q9H9J2 332 aaKnown RBP24.52■■□□□ 1.52
LRRK1-208ENST00000532029 RNF216Q9NWF9 866 aaPredicted RBP24.52■■□□□ 1.52
LRRK1-208ENST00000532029 HOOK1Q9UJC3 728 aaKnown RBP24.52■■□□□ 1.52
LRRK1-208ENST00000532029 PVALEFA0A1B0GWK0 134 aa24.51■■□□□ 1.51
LRRK1-208ENST00000532029 B4GALT5O43286 388 aa24.51■■□□□ 1.51
LRRK1-208ENST00000532029 ATP2A2P16615 1042 aaKnown RBP24.51■■□□□ 1.51
LRRK1-208ENST00000532029 ARF4P18085 180 aaPredicted RBP24.51■■□□□ 1.51
LRRK1-208ENST00000532029 IBSPP21815 317 aaPredicted RBP24.51■■□□□ 1.51
LRRK1-208ENST00000532029 NMT1P30419 496 aaKnown RBP24.51■■□□□ 1.51
LRRK1-208ENST00000532029 DEFB103AP81534 67 aa24.51■■□□□ 1.51
LRRK1-208ENST00000532029 CCDC47Q96A33 483 aaKnown RBP24.51■■□□□ 1.51
LRRK1-208ENST00000532029 CCDC51Q96ER9 411 aa24.51■■□□□ 1.51
LRRK1-208ENST00000532029 OLFML3Q9NRN5 406 aa24.51■■□□□ 1.51
LRRK1-208ENST00000532029 TBC1D7Q9P0N9 293 aa24.51■■□□□ 1.51
LRRK1-208ENST00000532029 CNTNAP2Q9UHC6 1331 aa24.51■■□□□ 1.51
LRRK1-208ENST00000532029 HOXA11P31270 313 aaPredicted RBP24.5■■□□□ 1.51
LRRK1-208ENST00000532029 SARSP49591 514 aaKnown RBP24.5■■□□□ 1.51
LRRK1-208ENST00000532029 FIZ1Q96SL8 496 aa24.5■■□□□ 1.51
LRRK1-208ENST00000532029 MRPL4Q9BYD3 311 aaKnown RBP24.5■■□□□ 1.51
LRRK1-208ENST00000532029 LRFN2Q9ULH4 789 aa24.5■■□□□ 1.51
LRRK1-208ENST00000532029 MICAL3Q7RTP6 2002 aa24.5■■□□□ 1.51
LRRK1-208ENST00000532029 C9IYK1 514 aa24.49■■□□□ 1.51
LRRK1-208ENST00000532029 GCNT3O95395 438 aa24.49■■□□□ 1.51
LRRK1-208ENST00000532029 PRR29P0C7W0 189 aa24.49■■□□□ 1.51
LRRK1-208ENST00000532029 STAG3L1P0CL83 205 aa24.49■■□□□ 1.51
LRRK1-208ENST00000532029 POSTNQ15063 836 aa24.49■■□□□ 1.51
LRRK1-208ENST00000532029 TAS1R3Q7RTX0 852 aa24.49■■□□□ 1.51
LRRK1-208ENST00000532029 ZNF720Q7Z2F6 126 aa24.49■■□□□ 1.51
LRRK1-208ENST00000532029 ST6GALNAC4Q9H4F1 302 aa24.49■■□□□ 1.51
LRRK1-208ENST00000532029 LMBRD1Q9NUN5 540 aa24.49■■□□□ 1.51
LRRK1-208ENST00000532029 EXOC1Q9NV70 894 aa24.49■■□□□ 1.51
LRRK1-208ENST00000532029 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.48■■□□□ 1.51
LRRK1-208ENST00000532029 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.48■■□□□ 1.51
LRRK1-208ENST00000532029 N4BP3O15049 544 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 UPP2O95045 317 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 SKIP12755 728 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 RAB27AP51159 221 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 GTF2BQ00403 316 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 ALCAMQ13740 583 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 FAM26FQ5R3K3 315 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 FAM117BQ6P1L5 589 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 STXBP4Q6ZWJ1 553 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 NPAS4Q8IUM7 802 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 HERC6Q8IVU3 1022 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 KCNN1Q92952 543 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 HVCN1Q96D96 273 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 BICD1Q96G01 975 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 ZBED2Q9BTP6 218 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 TBX20Q9UMR3 447 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 PCDHB13Q9Y5F0 798 aa24.48■■□□□ 1.51
LRRK1-208ENST00000532029 A0A1B0GUA9 196 aa24.47■■□□□ 1.51
LRRK1-208ENST00000532029 FAM189BP81408 668 aa24.47■■□□□ 1.51
LRRK1-208ENST00000532029 DPYDQ12882 1025 aa24.47■■□□□ 1.51
LRRK1-208ENST00000532029 ZC2HC1CQ53FD0 456 aaPredicted RBP24.47■■□□□ 1.51
LRRK1-208ENST00000532029 NT5DC1Q5TFE4 455 aa24.47■■□□□ 1.51
LRRK1-208ENST00000532029 ATF7IP2Q5U623 682 aa24.47■■□□□ 1.51
LRRK1-208ENST00000532029 SLC27A1Q6PCB7 646 aa24.47■■□□□ 1.51
LRRK1-208ENST00000532029 APBB1IPQ7Z5R6 666 aaPredicted RBP24.47■■□□□ 1.51
LRRK1-208ENST00000532029 TOP1MTQ969P6 601 aa24.47■■□□□ 1.51
LRRK1-208ENST00000532029 ADPGKQ9BRR6 497 aa24.47■■□□□ 1.51
LRRK1-208ENST00000532029 TRAIPQ9BWF2 469 aa24.47■■□□□ 1.51
LRRK1-208ENST00000532029 TRIM6Q9C030 488 aaPredicted RBP24.47■■□□□ 1.51
LRRK1-208ENST00000532029 FAM105AQ9NUU6 356 aa24.47■■□□□ 1.51
LRRK1-208ENST00000532029 USP20Q9Y2K6 914 aa24.47■■□□□ 1.51
LRRK1-208ENST00000532029 PCDHB7Q9Y5E2 793 aa24.47■■□□□ 1.51
LRRK1-208ENST00000532029 A0A0U1RQF3 1178 aa24.46■■□□□ 1.51
LRRK1-208ENST00000532029 TTLL13PA6NNM8 815 aa24.46■■□□□ 1.51
LRRK1-208ENST00000532029 KLRC4O43908 158 aa24.46■■□□□ 1.51
LRRK1-208ENST00000532029 RPN1P04843 607 aaKnown RBP24.46■■□□□ 1.51
LRRK1-208ENST00000532029 EDN1P05305 212 aa24.46■■□□□ 1.51
LRRK1-208ENST00000532029 PNOCQ13519 176 aa24.46■■□□□ 1.51
LRRK1-208ENST00000532029 TMCO2Q7Z6W1 182 aaPredicted RBP24.46■■□□□ 1.51
LRRK1-208ENST00000532029 CDR2LQ86X02 465 aaPredicted RBP24.46■■□□□ 1.51
LRRK1-208ENST00000532029 ECHDC2Q86YB7 292 aa24.46■■□□□ 1.51
LRRK1-208ENST00000532029 RNF169Q8NCN4 708 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms