RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 SART3Q15020 963 aaKnown RBP5.76□□□□□ -1.49
USP47-211ENST00000531513 Q6ZRM9 215 aa5.76□□□□□ -1.49
USP47-211ENST00000531513 SMC5Q8IY18 1101 aa5.76□□□□□ -1.49
USP47-211ENST00000531513 NXPE1Q8N323 547 aa5.76□□□□□ -1.49
USP47-211ENST00000531513 RABGGTAQ92696 567 aa5.76□□□□□ -1.49
USP47-211ENST00000531513 CRAMP1Q96RY5 1269 aa5.76□□□□□ -1.49
USP47-211ENST00000531513 RTFDC1Q9BY42 306 aaPredicted RBP5.76□□□□□ -1.49
USP47-211ENST00000531513 ZNF891A8MT65 544 aaPredicted RBP5.75□□□□□ -1.49
USP47-211ENST00000531513 EIF5BO60841 1220 aaKnown RBP5.75□□□□□ -1.49
USP47-211ENST00000531513 RAMP2O60895 175 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 PPFIA2O75334 1257 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 GLRX3O76003 335 aaKnown RBP5.75□□□□□ -1.49
USP47-211ENST00000531513 FKBP9O95302 570 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 PEX11BO96011 259 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 APEX1P27695 318 aaKnown RBP5.75□□□□□ -1.49
USP47-211ENST00000531513 ATP2C1P98194 919 aaPredicted RBP5.75□□□□□ -1.49
USP47-211ENST00000531513 DSG1Q02413 1049 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 ACAP1Q15027 740 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 TMEM177Q53S58 311 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 CATSPEREQ5SY80 951 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 NXNQ6DKJ4 435 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 FKBP9P1Q75LS8 142 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 OTOP1Q7RTM1 612 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 TCEAL8Q8IYN2 117 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 ANKRD35Q8N283 1001 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 IGSF22Q8N9C0 903 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 SMC1BQ8NDV3 1235 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 PRRX2Q99811 253 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 ARNT2Q9HBZ2 717 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 ZNF180Q9UJW8 692 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 VWA7Q9Y334 891 aa5.75□□□□□ -1.49
USP47-211ENST00000531513 SLC12A8A0AV02 714 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 TRAF5O00463 557 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 PLIN1O60240 522 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 RFPL1O75677 317 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 EIF3JO75822 258 aaKnown RBP5.74□□□□□ -1.49
USP47-211ENST00000531513 PRKD3O94806 890 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 ZBTB48P10074 688 aaPredicted RBP5.74□□□□□ -1.49
USP47-211ENST00000531513 ADCYAP1R1P41586 468 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 LSSP48449 732 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 MECP2P51608 486 aaKnown RBP5.74□□□□□ -1.49
USP47-211ENST00000531513 IL2P60568 153 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 MAP3K12Q12852 859 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 FAPQ12884 760 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 FAM102BQ5T8I3 360 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 ULK2Q8IYT8 1036 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 CALML6Q8TD86 181 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 RPS6KC1Q96S38 1066 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 TTPALQ9BTX7 342 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 GPRC5BQ9NZH0 403 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 ZKSCAN5Q9Y2L8 839 aa5.74□□□□□ -1.49
USP47-211ENST00000531513 GOLGA6CA6NDK9 693 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 GOLGA6BA6NDN3 693 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 GOLGA6L22H0YM25 854 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 K7ESF4 209 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 GAS7O60861 476 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 ABLIM3O94929 683 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 MYL1P05976 194 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 GOLGA6DP0CG33 693 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 ZSCAN20P17040 1043 aaPredicted RBP5.73□□□□□ -1.49
USP47-211ENST00000531513 ADCY7P51828 1080 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 COL10A1Q03692 680 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 TMEM132BQ14DG7 1078 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 MLC1Q15049 377 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 ATP13A4Q4VNC1 1196 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 IQSEC1Q6DN90 963 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 KLHDC10Q6PID8 442 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 JPH3Q8WXH2 748 aaPredicted RBP5.73□□□□□ -1.49
USP47-211ENST00000531513 ERCC4Q92889 916 aaPredicted RBP5.73□□□□□ -1.49
USP47-211ENST00000531513 MIEF2Q96C03 454 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 SLC7A6OSQ96CW6 309 aaPredicted RBP5.73□□□□□ -1.49
USP47-211ENST00000531513 GPR101Q96P66 508 aaPredicted RBP5.73□□□□□ -1.49
USP47-211ENST00000531513 CABP5Q9NP86 173 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 GOLGA6AQ9NYA3 693 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 B4GALT6Q9UBX8 382 aa5.73□□□□□ -1.49
USP47-211ENST00000531513 NOB1Q9ULX3 412 aaKnown RBP5.73□□□□□ -1.49
USP47-211ENST00000531513 FOXN1O15353 648 aa5.72□□□□□ -1.49
USP47-211ENST00000531513 RPS6KA4O75676 772 aa5.72□□□□□ -1.49
USP47-211ENST00000531513 ADAM8P78325 824 aa5.72□□□□□ -1.49
USP47-211ENST00000531513 IRF9Q00978 393 aa5.72□□□□□ -1.49
USP47-211ENST00000531513 OCRLQ01968 901 aa5.72□□□□□ -1.49
USP47-211ENST00000531513 ALDH6A1Q02252 535 aaKnown RBP5.72□□□□□ -1.49
USP47-211ENST00000531513 HDAC1Q13547 482 aaPredicted RBP5.72□□□□□ -1.49
USP47-211ENST00000531513 CNGB1Q14028 1251 aaPredicted RBP5.72□□□□□ -1.49
USP47-211ENST00000531513 TOB2Q14106 344 aaPredicted RBP5.72□□□□□ -1.49
USP47-211ENST00000531513 PTPN21Q16825 1174 aa5.72□□□□□ -1.49
USP47-211ENST00000531513 GAREM2Q75VX8 874 aa5.72□□□□□ -1.49
USP47-211ENST00000531513 RTN4RL1Q86UN2 441 aaPredicted RBP5.72□□□□□ -1.49
USP47-211ENST00000531513 CBARPQ8N350 705 aaPredicted RBP5.72□□□□□ -1.49
USP47-211ENST00000531513 C2orf69Q8N8R5 385 aa5.72□□□□□ -1.49
USP47-211ENST00000531513 LPPQ93052 612 aa5.72□□□□□ -1.49
USP47-211ENST00000531513 FOXRED1Q96CU9 486 aaPredicted RBP5.72□□□□□ -1.49
USP47-211ENST00000531513 GPHA2Q96T91 129 aa5.72□□□□□ -1.49
USP47-211ENST00000531513 RHOBTB2Q9BYZ6 727 aa5.72□□□□□ -1.49
USP47-211ENST00000531513 SLC6A15Q9H2J7 730 aa5.72□□□□□ -1.49
USP47-211ENST00000531513 MAGEL2Q9UJ55 1249 aa5.72□□□□□ -1.49
USP47-211ENST00000531513 PRPF3O43395 683 aaKnown RBP5.71□□□□□ -1.5
USP47-211ENST00000531513 HIP1RO75146 1068 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 ULK1O75385 1050 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 MAN2A2P49641 1150 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms