RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 MARCH6O60337 910 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 B4GALT3O60512 393 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 ZNF623O75123 536 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 GLUD1P00367 558 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 ADH1AP07327 375 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 ITGA4P13612 1032 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 CIITAP33076 1130 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 RAB27AP51159 221 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 TARBP2Q15633 366 aaKnown RBP10.36□□□□□ -0.75
NEDD8-206ENST00000531430 PLA2G4FQ68DD2 849 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 AGMOQ6ZNB7 445 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 RASEFQ8IZ41 740 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 GPR152Q8TDT2 470 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 SLC5A5Q92911 643 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 BRF1Q92994 677 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 MYADMQ96S97 322 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 RIT2Q99578 217 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 APOL6Q9BWW8 343 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 NIFKQ9BYG3 293 aaKnown RBP10.36□□□□□ -0.75
NEDD8-206ENST00000531430 SEMA4AQ9H3S1 761 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 VPS54Q9P1Q0 977 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 SSX2IPQ9Y2D8 614 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 GVINP1Q7Z2Y8 2422 aa10.36□□□□□ -0.75
NEDD8-206ENST00000531430 ESYT2A0FGR8 921 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 TEX28O15482 410 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 N4BP1O75113 896 aaKnown RBP10.35□□□□□ -0.75
NEDD8-206ENST00000531430 MAFO75444 373 aaPredicted RBP10.35□□□□□ -0.75
NEDD8-206ENST00000531430 NR1I2O75469 434 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 USP11P51784 963 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 NPEPPSP55786 919 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 CCT2P78371 535 aaKnown RBP10.35□□□□□ -0.75
NEDD8-206ENST00000531430 KRT32Q14532 448 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 DCLRE1AQ6PJP8 1040 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 C15orf39Q6ZRI6 1047 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 GET4Q7L5D6 327 aaPredicted RBP10.35□□□□□ -0.75
NEDD8-206ENST00000531430 ZNF410Q86VK4 478 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 TBCKQ8TEA7 893 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 TMEM143Q96AN5 459 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 LENG9Q96B70 501 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 RPS6KC1Q96S38 1066 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 JPH2Q9BR39 696 aaPredicted RBP10.35□□□□□ -0.75
NEDD8-206ENST00000531430 TMEM175Q9BSA9 504 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 WDR6Q9NNW5 1121 aaKnown RBP10.35□□□□□ -0.75
NEDD8-206ENST00000531430 STK39Q9UEW8 545 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 DPP7Q9UHL4 492 aa10.35□□□□□ -0.75
NEDD8-206ENST00000531430 LILRB3O75022 631 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 TDP2O95551 362 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 SOD2P04179 222 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 SP9P0CG40 484 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 SRFP11831 508 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 GLUD2P49448 558 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 NCBP1Q09161 790 aaKnown RBP10.34□□□□□ -0.75
NEDD8-206ENST00000531430 ZC3H14Q6PJT7 736 aaKnown RBP10.34□□□□□ -0.75
NEDD8-206ENST00000531430 C1orf210Q8IVY1 113 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 CCDC148Q8NFR7 591 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 PRPF31Q8WWY3 499 aaKnown RBP10.34□□□□□ -0.75
NEDD8-206ENST00000531430 SLC7A3Q8WY07 619 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 RSPH1Q8WYR4 309 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 RABGGTAQ92696 567 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 CEP170P1Q96L14 293 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 B3GALT6Q96L58 329 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 GAD1Q99259 594 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 TRAIPQ9BWF2 469 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 COLEC11Q9BWP8 271 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 FOXQ1Q9C009 403 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 POLIQ9UNA4 740 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 COL4A3BPQ9Y5P4 624 aa10.34□□□□□ -0.75
NEDD8-206ENST00000531430 CLUHO75153 1309 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 IGKV6-21A0A0C4DH24 114 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 EDIL3O43854 480 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 LRRN2O75325 713 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 TADA2AO75478 443 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 PSMD10O75832 226 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 ERLIN2O94905 339 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 STBD1O95210 358 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 HMGB1P09429 215 aaKnown RBP10.33□□□□□ -0.76
NEDD8-206ENST00000531430 LAMP2P13473 410 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 RPL17P18621 184 aaKnown RBP10.33□□□□□ -0.76
NEDD8-206ENST00000531430 PSMC5P62195 406 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 SNW1Q13573 536 aaKnown RBP10.33□□□□□ -0.76
NEDD8-206ENST00000531430 PUM1Q14671 1186 aaKnown RBP eCLIP10.33□□□□□ -0.762e-9■■□□□ 12.1
NEDD8-206ENST00000531430 BLOC1S2Q6QNY1 142 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 ANO5Q75V66 913 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 SRGAP1Q7Z6B7 1085 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 MRPL10Q7Z7H8 261 aaKnown RBP10.33□□□□□ -0.76
NEDD8-206ENST00000531430 ZNF579Q8NAF0 562 aaKnown RBP10.33□□□□□ -0.76
NEDD8-206ENST00000531430 RNF149Q8NC42 400 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 CMASQ8NFW8 434 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-206ENST00000531430 RDM1Q8NG50 284 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 RUBCNQ92622 972 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 NXPE3Q969Y0 559 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 CPB2Q96IY4 423 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 JAKMIP1Q96N16 626 aaKnown RBP10.33□□□□□ -0.76
NEDD8-206ENST00000531430 HERC2P3Q9BVR0 1158 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 NT5C3AQ9H0P0 336 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 RNF39Q9H2S5 420 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 IFT122Q9HBG6 1241 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 UBN1Q9NPG3 1134 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 ARHGEF3Q9NR81 526 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 AGPAT5Q9NUQ2 364 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms