RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 CAPN14A8MX76 684 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 CLASP2O75122 1294 aaKnown RBP5.28□□□□□ -1.56
SOX6-214ENST00000531297 C1SP09871 688 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 AOAHP28039 575 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 ADCY8P40145 1251 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 MRE11P49959 708 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 IL13RA1P78552 427 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 FOXL1Q12952 345 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 STILQ15468 1287 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 NTRK3Q16288 839 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 C16orf59Q7L2K0 433 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 HNRNPLLQ8WVV9 542 aaKnown RBP5.28□□□□□ -1.56
SOX6-214ENST00000531297 IP6K1Q92551 441 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 PRDM11Q9NQV5 511 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 KIAA1522Q9P206 1035 aaPredicted RBP5.28□□□□□ -1.56
SOX6-214ENST00000531297 POLKQ9UBT6 870 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 RTL1A6NKG5 1358 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 FLT4P35916 1363 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 JCADQ9P266 1359 aa5.28□□□□□ -1.56
SOX6-214ENST00000531297 USP19O94966 1318 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 RNF123Q5XPI4 1314 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 COL3A1P02461 1466 aaPredicted RBP5.27□□□□□ -1.57
SOX6-214ENST00000531297 RGPD8O14715 1765 aaPredicted RBP5.27□□□□□ -1.57
SOX6-214ENST00000531297 OVOS2A0A0J9YW53 1432 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 SLC26A4O43511 780 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 RAMP2O60895 175 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 U2AF1L5P0DN76 240 aaPredicted RBP5.27□□□□□ -1.57
SOX6-214ENST00000531297 ECE1P42892 770 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 EVA1CP58658 441 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 NANOS3P60323 173 aaKnown RBP5.27□□□□□ -1.57
SOX6-214ENST00000531297 SUMO1P63165 101 aaKnown RBP5.27□□□□□ -1.57
SOX6-214ENST00000531297 DGCR2P98153 550 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 U2AF1Q01081 240 aaKnown RBP eCLIP5.27□□□□□ -1.57
SOX6-214ENST00000531297 GUCY1A3Q02108 690 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 PCOLCEQ15113 449 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 GRAMD4Q6IC98 578 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 OVOS2Q6IE36 1432 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 FILIP1Q7Z7B0 1213 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 FAM9BQ8IZU0 186 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 SHCBP1Q8NEM2 672 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 OR10A5Q9H207 317 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 MMRN2Q9H8L6 949 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 VWA7Q9Y334 891 aa5.27□□□□□ -1.57
SOX6-214ENST00000531297 XIRP1Q702N8 1843 aaKnown RBP5.27□□□□□ -1.57
SOX6-214ENST00000531297 PXDNQ92626 1479 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 SPATA31A6Q5VVP1 1343 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 MAPK8IP3Q9UPT6 1336 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 FAM90A27PA6NNH2 459 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 PPFIA4O75335 1185 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 PDE6AP16499 860 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 KRT15P19012 456 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 KRTAP1-1Q07627 177 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 DUSP8Q13202 625 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 RRS1Q15050 365 aaKnown RBP5.26□□□□□ -1.57
SOX6-214ENST00000531297 MEX3CQ5U5Q3 659 aaKnown RBP5.26□□□□□ -1.57
SOX6-214ENST00000531297 TMEM200BQ69YZ2 307 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 TRIM68Q6AZZ1 485 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 ARHGEF25Q86VW2 580 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 TMPRSS6Q8IU80 811 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 SH3RF2Q8TEC5 729 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 DDX17Q92841 729 aaKnown RBP5.26□□□□□ -1.57
SOX6-214ENST00000531297 KIAA1683Q9H0B3 1180 aa5.26□□□□□ -1.57
SOX6-214ENST00000531297 AHDC1Q5TGY3 1603 aaPredicted RBP5.26□□□□□ -1.57
SOX6-214ENST00000531297 MAP3K19Q56UN5 1328 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 USP54Q70EL1 1684 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 ROBO1Q9Y6N7 1651 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.25□□□□□ -1.57
SOX6-214ENST00000531297 MAN2B1O00754 1011 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 H2AFYO75367 372 aaKnown RBP5.25□□□□□ -1.57
SOX6-214ENST00000531297 HOXC9P31274 260 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 PTGS2P35354 604 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 ZC3H6P61129 1189 aaKnown RBP5.25□□□□□ -1.57
SOX6-214ENST00000531297 GABREP78334 506 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 LMOD3Q0VAK6 560 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 NOLC1Q14978 699 aaKnown RBP eCLIP5.25□□□□□ -1.57
SOX6-214ENST00000531297 PTRH1Q86Y79 214 aaKnown RBP5.25□□□□□ -1.57
SOX6-214ENST00000531297 MCF2L2Q86YR7 1114 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 ZC3H7AQ8IWR0 971 aaKnown RBP5.25□□□□□ -1.57
SOX6-214ENST00000531297 CELF2-AS1Q8N7Q2 184 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 FBXO41Q8TF61 875 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 RUNDC1Q96C34 613 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 SPATA9Q9BWV2 254 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 CDC42EP3Q9UKI2 254 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 CPDO75976 1380 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 PNPLA6Q8IY17 1366 aa5.25□□□□□ -1.57
SOX6-214ENST00000531297 MARF1Q9Y4F3 1742 aaKnown RBP5.25□□□□□ -1.57
SOX6-214ENST00000531297 CDK12Q9NYV4 1490 aaPredicted RBP5.25□□□□□ -1.57
SOX6-214ENST00000531297 ZNF521Q96K83 1311 aa5.24□□□□□ -1.57
SOX6-214ENST00000531297 NHSL1Q5SYE7 1610 aa5.24□□□□□ -1.57
SOX6-214ENST00000531297 PHLPP1O60346 1717 aa5.24□□□□□ -1.57
SOX6-214ENST00000531297 A0A1W2PRX2 142 aa5.24□□□□□ -1.57
SOX6-214ENST00000531297 BLACEA4D250 179 aa5.24□□□□□ -1.57
SOX6-214ENST00000531297 MATN2O00339 956 aa5.24□□□□□ -1.57
SOX6-214ENST00000531297 HIP1RO75146 1068 aa5.24□□□□□ -1.57
SOX6-214ENST00000531297 RHOBTB3O94955 611 aa5.24□□□□□ -1.57
SOX6-214ENST00000531297 TCF3P15923 654 aa5.24□□□□□ -1.57
SOX6-214ENST00000531297 APEX1P27695 318 aaKnown RBP5.24□□□□□ -1.57
SOX6-214ENST00000531297 CALD1Q05682 793 aaKnown RBP5.24□□□□□ -1.57
SOX6-214ENST00000531297 MOGSQ13724 837 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms