RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 TPRNQ4KMQ1 711 aa24.8■■□□□ 1.56
TRAPPC4-210ENST00000531290 AGMOQ6ZNB7 445 aa24.8■■□□□ 1.56
TRAPPC4-210ENST00000531290 DDX53Q86TM3 631 aaKnown RBP24.8■■□□□ 1.56
TRAPPC4-210ENST00000531290 CNNM3Q8NE01 707 aa24.8■■□□□ 1.56
TRAPPC4-210ENST00000531290 FAM193BQ96PV7 902 aaPredicted RBP24.8■■□□□ 1.56
TRAPPC4-210ENST00000531290 APOL5Q9BWW9 433 aa24.8■■□□□ 1.56
TRAPPC4-210ENST00000531290 RSAD1Q9HA92 442 aa24.8■■□□□ 1.56
TRAPPC4-210ENST00000531290 XPNPEP1Q9NQW7 623 aa24.8■■□□□ 1.56
TRAPPC4-210ENST00000531290 CNTNAP2Q9UHC6 1331 aa24.8■■□□□ 1.56
TRAPPC4-210ENST00000531290 KIAA1671Q9BY89 1806 aa24.79■■□□□ 1.56
TRAPPC4-210ENST00000531290 WNT7AO00755 349 aa24.79■■□□□ 1.56
TRAPPC4-210ENST00000531290 ALDH2P05091 517 aa24.79■■□□□ 1.56
TRAPPC4-210ENST00000531290 AXLP30530 894 aa24.79■■□□□ 1.56
TRAPPC4-210ENST00000531290 MCM7P33993 719 aa24.79■■□□□ 1.56
TRAPPC4-210ENST00000531290 PTENP60484 403 aa24.79■■□□□ 1.56
TRAPPC4-210ENST00000531290 GIT2Q14161 759 aa24.79■■□□□ 1.56
TRAPPC4-210ENST00000531290 CBX2Q14781 532 aaPredicted RBP24.79■■□□□ 1.56
TRAPPC4-210ENST00000531290 UBXN11Q5T124 520 aa24.79■■□□□ 1.56
TRAPPC4-210ENST00000531290 SYCE2Q6PIF2 218 aa24.79■■□□□ 1.56
TRAPPC4-210ENST00000531290 TMEM173Q86WV6 379 aaPredicted RBP24.79■■□□□ 1.56
TRAPPC4-210ENST00000531290 UBN1Q9NPG3 1134 aa24.79■■□□□ 1.56
TRAPPC4-210ENST00000531290 HCFC2Q9Y5Z7 792 aa24.79■■□□□ 1.56
TRAPPC4-210ENST00000531290 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 INO80B-WBP1J3KQ70 363 aa24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 CLASP2O75122 1294 aaKnown RBP24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 XRCC6P12956 609 aaKnown RBP eCLIP24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 SLC11A1P49279 550 aa24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 POU5F1BQ06416 359 aa24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 ST3GAL1Q11201 340 aa24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 NOTUMQ6P988 496 aa24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 ZNF280BQ86YH2 543 aa24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 CCDC83Q8IWF9 413 aa24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 PIGOQ8TEQ8 1089 aa24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 EDAQ92838 391 aa24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 C8orf76Q96K31 380 aa24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 LLPHQ9BRT6 129 aaKnown RBP24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 ZBP1Q9H171 429 aa24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 DNAJB4Q9UDY4 337 aa24.78■■□□□ 1.56
TRAPPC4-210ENST00000531290 CTSAP10619 480 aa24.77■■□□□ 1.56
TRAPPC4-210ENST00000531290 ITGA4P13612 1032 aa24.77■■□□□ 1.56
TRAPPC4-210ENST00000531290 NCLP19338 710 aaKnown RBP24.77■■□□□ 1.56
TRAPPC4-210ENST00000531290 ARL2P36404 184 aa24.77■■□□□ 1.56
TRAPPC4-210ENST00000531290 RARRES1P49788 294 aa24.77■■□□□ 1.56
TRAPPC4-210ENST00000531290 CES5AQ6NT32 575 aa24.77■■□□□ 1.56
TRAPPC4-210ENST00000531290 CCDC51Q96ER9 411 aa24.77■■□□□ 1.56
TRAPPC4-210ENST00000531290 TMEM60Q9H2L4 133 aa24.77■■□□□ 1.56
TRAPPC4-210ENST00000531290 STK39Q9UEW8 545 aa24.77■■□□□ 1.56
TRAPPC4-210ENST00000531290 POTEMA6NI47 508 aa24.76■■□□□ 1.55
TRAPPC4-210ENST00000531290 TSPAN1O60635 241 aa24.76■■□□□ 1.55
TRAPPC4-210ENST00000531290 POMCP01189 267 aa24.76■■□□□ 1.55
TRAPPC4-210ENST00000531290 ASAP3Q8TDY4 903 aa24.76■■□□□ 1.55
TRAPPC4-210ENST00000531290 AUTS2Q8WXX7 1259 aa24.76■■□□□ 1.55
TRAPPC4-210ENST00000531290 TMEM175Q9BSA9 504 aa24.76■■□□□ 1.55
TRAPPC4-210ENST00000531290 FAN1Q9Y2M0 1017 aa24.76■■□□□ 1.55
TRAPPC4-210ENST00000531290 IRAK3Q9Y616 596 aa24.76■■□□□ 1.55
TRAPPC4-210ENST00000531290 PLXNA4Q9HCM2 1894 aa24.76■■□□□ 1.55
TRAPPC4-210ENST00000531290 ATG2AQ2TAZ0 1938 aa24.76■■□□□ 1.55
TRAPPC4-210ENST00000531290 A0A087WWV3 80 aa24.75■■□□□ 1.55
TRAPPC4-210ENST00000531290 DDHD2O94830 711 aa24.75■■□□□ 1.55
TRAPPC4-210ENST00000531290 AFF1P51825 1210 aaKnown RBP24.75■■□□□ 1.55
TRAPPC4-210ENST00000531290 ITIH3Q06033 890 aa24.75■■□□□ 1.55
TRAPPC4-210ENST00000531290 CAPSQ13938 189 aa24.75■■□□□ 1.55
TRAPPC4-210ENST00000531290 IFNLR1Q8IU57 520 aaPredicted RBP24.75■■□□□ 1.55
TRAPPC4-210ENST00000531290 BCL7CQ8WUZ0 217 aaPredicted RBP24.75■■□□□ 1.55
TRAPPC4-210ENST00000531290 CPB2Q96IY4 423 aa24.75■■□□□ 1.55
TRAPPC4-210ENST00000531290 ZSCAN31Q96LW9 406 aaPredicted RBP24.75■■□□□ 1.55
TRAPPC4-210ENST00000531290 MFSD14AQ96MC6 490 aa24.75■■□□□ 1.55
TRAPPC4-210ENST00000531290 ADAM7Q9H2U9 754 aa24.75■■□□□ 1.55
TRAPPC4-210ENST00000531290 TUFT1Q9NNX1 390 aa24.75■■□□□ 1.55
TRAPPC4-210ENST00000531290 IPPQ9Y573 584 aa24.75■■□□□ 1.55
TRAPPC4-210ENST00000531290 C5orf42Q9H799 3197 aa24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 GLRA2P23416 452 aa24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 RBM25P49756 843 aaKnown RBP24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 HMGN5P82970 282 aaKnown RBP24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 GNL2Q13823 731 aaKnown RBP24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 HFE2Q6ZVN8 426 aa24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 HACE1Q8IYU2 909 aa24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 FAM184AQ8NB25 1140 aa24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 SMG8Q8ND04 991 aaKnown RBP24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 ERMNQ8TAM6 284 aa24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 EIF2AQ9BY44 585 aaKnown RBP24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 NFKBIZQ9BYH8 718 aa24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 TRIM6Q9C030 488 aaPredicted RBP24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 CSRNP2Q9H175 543 aa24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 POLR3FQ9H1D9 316 aaPredicted RBP24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 FOXP1Q9H334 677 aaPredicted RBP24.74■■□□□ 1.55
TRAPPC4-210ENST00000531290 USO1O60763 962 aaKnown RBP24.73■■□□□ 1.55
TRAPPC4-210ENST00000531290 SPATA31C1P0DKV0 1188 aa24.73■■□□□ 1.55
TRAPPC4-210ENST00000531290 MBTD1Q05BQ5 628 aa24.73■■□□□ 1.55
TRAPPC4-210ENST00000531290 ZNF174Q15697 407 aa24.73■■□□□ 1.55
TRAPPC4-210ENST00000531290 MAEAQ7L5Y9 396 aa24.73■■□□□ 1.55
TRAPPC4-210ENST00000531290 CATSPER3Q86XQ3 398 aa24.73■■□□□ 1.55
TRAPPC4-210ENST00000531290 NECTIN4Q96NY8 510 aa24.73■■□□□ 1.55
TRAPPC4-210ENST00000531290 NACC1Q96RE7 527 aa24.73■■□□□ 1.55
TRAPPC4-210ENST00000531290 EMILIN2Q9BXX0 1053 aa24.73■■□□□ 1.55
TRAPPC4-210ENST00000531290 DZANK1Q9NVP4 752 aa24.73■■□□□ 1.55
TRAPPC4-210ENST00000531290 NR2E1Q9Y466 385 aa24.73■■□□□ 1.55
TRAPPC4-210ENST00000531290 NRP1O14786 923 aa24.72■■□□□ 1.55
TRAPPC4-210ENST00000531290 B4GALT3O60512 393 aa24.72■■□□□ 1.55
TRAPPC4-210ENST00000531290 ZXDAP98168 799 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms