RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 PLA2G4FQ68DD2 849 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 TWF2Q6IBS0 349 aaKnown RBP10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 CCDC105Q8IYK2 499 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 ZNF710Q8N1W2 664 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 ETNPPLQ8TBG4 499 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 TBC1D32Q96NH3 1257 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 SCLT1Q96NL6 688 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 TEKT3Q9BXF9 490 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 AGXT2Q9BYV1 514 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 GBP3Q9H0R5 595 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 MFSD1Q9H3U5 465 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 MINDY3Q9H8M7 445 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 KCNK12Q9HB15 430 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 NCOA5Q9HCD5 579 aaKnown RBP10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 CYP26B1Q9NR63 512 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 NRBP2Q9NSY0 501 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 MARCH5Q9NX47 278 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 WRAP73Q9P2S5 460 aaPredicted RBP10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 NAP1L2Q9ULW6 460 aaPredicted RBP10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 PIN4Q9Y237 131 aaKnown RBP10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 EML1O00423 815 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 MAFO75444 373 aaPredicted RBP10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 SSBP05455 408 aaKnown RBP eCLIP10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 HOXB3P14651 431 aaPredicted RBP10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 SFPQP23246 707 aaKnown RBP eCLIP10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 GNA11P29992 359 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 HOXA11P31270 313 aaPredicted RBP10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 DEKP35659 375 aaKnown RBP10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 Q4G0T1 1027 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 XKR3Q5GH77 459 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 GLB1LQ6UWU2 654 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 TAS1R1Q7RTX1 841 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 CABP7Q86V35 215 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 RHPN2Q8IUC4 686 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 RNF168Q8IYW5 571 aaPredicted RBP10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 FLCNQ8NFG4 579 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 TBCKQ8TEA7 893 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 RSAD2Q8WXG1 361 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 NLRP4Q96MN2 994 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 MBOAT7Q96N66 472 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 GCOM2Q9BZD3 368 aaPredicted RBP10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 SEMA4AQ9H3S1 761 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 SFXN1Q9H9B4 322 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 SH2B1Q9NRF2 756 aaPredicted RBP10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 AGPAT5Q9NUQ2 364 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 SUCLA2Q9P2R7 463 aaPredicted RBP10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 TCEAL9Q9UHQ7 104 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 DUSP12Q9UNI6 340 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 PCDHB2Q9Y5E7 798 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 SNX14Q9Y5W7 946 aa10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 MAP1BP46821 2468 aaKnown RBP10.33□□□□□ -0.76
CHMP4A-205ENST00000531158 CYP3A7-CYP3A51PA0A087WV96 503 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 KRBA1A5PL33 1030 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 SLC37A4O43826 429 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 IFNAR1P17181 557 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 CYP3A7P24462 503 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 USP11P51784 963 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 NPEPPSP55786 919 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 TDGQ13569 410 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 GIT2Q14161 759 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 ANGPT1Q15389 498 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 LETM2Q2VYF4 491 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 KIAA0319Q5VV43 1072 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 CCDC149Q6ZUS6 474 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 MIER3Q7Z3K6 550 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 MRPL10Q7Z7H8 261 aaKnown RBP10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 ZNF410Q86VK4 478 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 SIX5Q8N196 739 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 PLCD3Q8N3E9 789 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 FBXL16Q8N461 479 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 SMG8Q8ND04 991 aaKnown RBP10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 CCDC12Q8WUD4 166 aaPredicted RBP10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 JAKMIP1Q96N16 626 aaKnown RBP10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 AIFM3Q96NN9 605 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 SLC26A6Q9BXS9 759 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 RNF26Q9BY78 433 aaPredicted RBP10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 VAV3Q9UKW4 847 aa10.32□□□□□ -0.76
CHMP4A-205ENST00000531158 USP24Q9UPU5 2620 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 COL4A2P08572 1712 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 CCDC196A0A1B0GTZ2 297 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 NRP1O14786 923 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 RFPL2O75678 378 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 PAPLNO95428 1278 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 POMCP01189 267 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 MYBP10242 640 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 PDIA3P30101 505 aaKnown RBP10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 HSPA4P34932 840 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 RAB27AP51159 221 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 EVCP57679 992 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 KRT32Q14532 448 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 C15orf39Q6ZRI6 1047 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 OTOP3Q7RTS5 596 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 CATSPER4Q7RTX7 472 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 DCLK2Q8N568 766 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 DTWD2Q8NBA8 298 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 CCDC148Q8NFR7 591 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 RDM1Q8NG50 284 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 ZNF707Q96C28 371 aaPredicted RBP10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 B3GALT6Q96L58 329 aa10.31□□□□□ -0.76
CHMP4A-205ENST00000531158 MYADMQ96S97 322 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms